RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 ELLP55199 621 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-217ENST00000639276 DLX1P56177 255 aa7.34□□□□□ -1.23
NECAP1-217ENST00000639276 MRPS11P82912 194 aaKnown RBP7.34□□□□□ -1.23
NECAP1-217ENST00000639276 ADORA2A-AS1P86434 159 aa7.34□□□□□ -1.23
NECAP1-217ENST00000639276 PRB3Q04118 309 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-217ENST00000639276 KLRB1Q12918 225 aa7.34□□□□□ -1.23
NECAP1-217ENST00000639276 ZNF726P1Q15940 193 aa7.34□□□□□ -1.23
NECAP1-217ENST00000639276 LRRC75BQ2VPJ9 315 aa7.34□□□□□ -1.23
NECAP1-217ENST00000639276 TMEM200BQ69YZ2 307 aa7.34□□□□□ -1.23
NECAP1-217ENST00000639276 WDR61Q9GZS3 305 aaKnown RBP7.34□□□□□ -1.23
NECAP1-217ENST00000639276 TRAV38-1A0A0B4J264 116 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 FGF8P55075 233 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 CASP6P55212 293 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 HBG1P69891 147 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 HBG2P69892 147 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 CD300LFQ8TDQ1 290 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 ZCCHC14Q8WYQ9 949 aaKnown RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 EGLN1Q9GZT9 426 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 CISD1Q9NZ45 108 aaKnown RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 ZNF729A6NN14 1252 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 PPIHO43447 177 aaKnown RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 IGKV1D-33P01593 117 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 IGKV1-33P01594 117 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 CD3EP07766 207 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 DEFA4P12838 97 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 CEBPGP53567 150 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 TFF3Q07654 80 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 PEA15Q15121 130 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 SP5Q6BEB4 398 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 LCN15Q6UWW0 184 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 TCTEX1D1Q8N7M0 179 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 TAF15Q92804 592 aaKnown RBP eCLIP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 DIRC2Q96SL1 478 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 NGBQ9NPG2 151 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 TMEM140Q9NV12 185 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 RPUSD1Q9UJJ7 312 aaKnown RBP7.33□□□□□ -1.24
NECAP1-217ENST00000639276 PRELID3BQ9Y3B1 194 aa7.33□□□□□ -1.24
NECAP1-217ENST00000639276 hADV38S2A0JD32 116 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 RBFOX3A6NFN3 312 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 NKX6-3A6NJ46 265 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 DVL1O14640 695 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 TNFRSF13BO14836 293 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-217ENST00000639276 HMGB3O15347 200 aaKnown RBP7.32□□□□□ -1.24
NECAP1-217ENST00000639276 LY6HO94772 140 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 SNAPINO95295 136 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 OPN1MWP04001 364 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 OPN1MW2P0DN77 364 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 OPN1MW3P0DN78 364 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 DAOP14920 347 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 APOBEC3AP31941 199 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-217ENST00000639276 REG1BP48304 166 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 RELBQ01201 579 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 DIAPH2-AS1Q14236 149 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 ABHD12Q8N2K0 398 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 CLRN3Q8NCR9 226 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 OR4A16Q8NH70 328 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 CORO2AQ92828 525 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 NCOR1P1Q9H4R4 102 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 LAMP3Q9UQV4 416 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 SRRM4A7MD48 611 aaKnown RBP7.32□□□□□ -1.24
NECAP1-217ENST00000639276 RRHO14718 337 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 CT45A6P0DMU7 189 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 CT45A5P0DMU8 189 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 CT45A7P0DMV0 189 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 NQO2P16083 231 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 COL8A2P25067 703 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 CHRNB4P30926 498 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 RAB7AP51149 207 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 ST6GALNAC3Q8NDV1 305 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 RHOVQ96L33 236 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 LINC00312Q9Y6C7 94 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 HIVEP3Q5T1R4 2406 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
NECAP1-217ENST00000639276 IGHV1-69-2A0A0G2JMI3 117 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 VSTM5A8MXK1 200 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 RAB2AP61019 212 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 OR4A47Q6IF82 309 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 ACSM6Q6P461 480 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 SLC25A48Q6ZT89 311 aaKnown RBP7.31□□□□□ -1.24
NECAP1-217ENST00000639276 C1orf87Q8N0U7 546 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 COMMD1Q8N668 190 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 OR10P1Q8NGE3 313 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 RXFP4Q8TDU9 374 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 MS4A5Q9H3V2 200 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 LINC00574Q9H8X3 128 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 NDRG3Q9UGV2 375 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 SNRNP70P08621 437 aaKnown RBP7.31□□□□□ -1.24
NECAP1-217ENST00000639276 ERVK-16P61578 105 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 TLE4Q04727 773 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
NECAP1-217ENST00000639276 OR4S2Q8NH73 311 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 TMEM170AQ8WVE7 144 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 RCC1LQ96I51 464 aaKnown RBP7.31□□□□□ -1.24
NECAP1-217ENST00000639276 ZNF714Q96N38 554 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 SLC35B3Q9H1N7 401 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 ARHGAP32A7KAX9 2087 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
NECAP1-217ENST00000639276 ITGB1BP1O14713 200 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms