RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 PCSK4Q6UW60 755 aa14.59□□□□□ -0.07
CACNA1A-253ENST00000637927 PRSS42Q7Z5A4 293 aa14.59□□□□□ -0.07
CACNA1A-253ENST00000637927 BCORQ6W2J9 1755 aa14.59□□□□□ -0.07
CACNA1A-253ENST00000637927 MRPL18Q9H0U6 180 aaKnown RBP14.59□□□□□ -0.07
CACNA1A-253ENST00000637927 TRAV24A0A0B4J272 114 aa14.58□□□□□ -0.07
CACNA1A-253ENST00000637927 SCARF2Q96GP6 870 aaPredicted RBP14.58□□□□□ -0.07
CACNA1A-253ENST00000637927 MRPL20Q9BYC9 149 aaKnown RBP14.58□□□□□ -0.07
CACNA1A-253ENST00000637927 TGIF2-C20orf24A0A0A6YYL0 155 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 TFF1P04155 84 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 IFT22Q9H7X7 185 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 KLK13Q9UKR3 277 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 NUP214P35658 2090 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 CLPSL1A2RUU4 121 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 GZMHP20718 246 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RPL32P62910 135 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 FOXA3P55318 350 aaPredicted RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RBMY1BA6NDE4 496 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RBMY1EA6NEQ0 496 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 EPOPA6NHQ4 379 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 CTSBP07858 339 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RBMY1DP0C7P1 496 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RBMY1A1P0DJD3 496 aaKnown RBP14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RBMY1CP0DJD4 496 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 LDLRAD2Q5SZI1 272 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 JMJD8Q96S16 334 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 LINC00862A6NCI5 91 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 RPL36A-HNRNPH2H7BZ11 118 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 VENTXO95231 258 aa14.58□□□□□ -0.08
CACNA1A-253ENST00000637927 PSG4Q00888 419 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 NUTF2P61970 127 aaKnown RBP14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 ICAM4Q14773 271 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 COLCA1Q6ZS62 124 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 CD8AP01732 235 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 CYB561D1Q8N8Q1 229 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 CD160O95971 181 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 CD7P09564 240 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 IGHV1-69-2A0A0G2JMI3 117 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 GGCTO75223 188 aaKnown RBP14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 PITX3O75364 302 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 APCDD1LQ8NCL9 501 aa14.57□□□□□ -0.08
CACNA1A-253ENST00000637927 A0A0J9YW62 118 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 A0A1W2PQF6 199 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 P2RY1P47900 373 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 INO80CQ6PI98 192 aaPredicted RBP14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 SCNM1Q9BWG6 230 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 SF3B5Q9BWJ5 86 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 MAP1BP46821 2468 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 KNL1Q8NG31 2342 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 PGA4P0DJD7 388 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 PGA5P0DJD9 388 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 FAM168AQ92567 244 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 ZNF107Q9UII5 783 aaPredicted RBP14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 CASP8AP2Q9UKL3 1982 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 LINC00305Q7Z4B0 112 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 TRAV2A0A0B4J234 112 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 SRIP30626 198 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 CHST5Q9GZS9 411 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 LEPROTL1O95214 131 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 S100A7L2Q5SY68 101 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 ANGPTL4Q9BY76 406 aa14.56□□□□□ -0.08
CACNA1A-253ENST00000637927 ATAD5Q96QE3 1844 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 C1QTNF9BB2RNN3 333 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 LYNX1G3V0Z9 82 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 HOXA3O43365 443 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 LYNX1P0DP58 116 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 PLPPR5Q32ZL2 321 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 ZNRF1Q8ND25 227 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 OR11H7Q8NGC8 314 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 OR4X2Q8NGF9 303 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 IL19Q9UHD0 177 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 RNF115Q9Y4L5 304 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 ERVK11-1P61568 191 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 SEMA5BQ9P283 1151 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 A0A1W2PP11 408 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 SAP30O75446 220 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 LSM6P62312 80 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 RPL8P62917 257 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 RPL39P5Q59GN2 51 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 KCNS1Q96KK3 526 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 NEU3Q9UQ49 428 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 ZNF318Q5VUA4 2279 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 C1QL1O75973 258 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 FBLN7Q53RD9 439 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 SH3BGRL3Q9H299 93 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 FBXL15Q9H469 300 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 IDI2-AS1Q9NZ38 188 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 C14orf144Q96I85 54 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 J3QT63 122 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 FOXS1O43638 330 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 LINC00158P58513 81 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 RPS11P62280 158 aaKnown RBP eCLIP14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 SRSF4Q08170 494 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 UQCC3Q6UW78 93 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 OR51G1Q8NGK1 321 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 PMCHL2Q9BQD1 86 aa14.55□□□□□ -0.08
CACNA1A-253ENST00000637927 PAX2Q02962 417 aa14.54□□□□□ -0.08
CACNA1A-253ENST00000637927 CFHR3Q02985 330 aa14.54□□□□□ -0.08
CACNA1A-253ENST00000637927 LEMD1Q68G75 181 aa14.54□□□□□ -0.08
CACNA1A-253ENST00000637927 DIDO1Q9BTC0 2240 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-253ENST00000637927 TRGC2P03986 189 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms