RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 SPRR3Q9UBC9 169 aa17.94■□□□□ 0.46
CLN5-215ENST00000636767 KLF13Q9Y2Y9 288 aaPredicted RBP17.94■□□□□ 0.46
CLN5-215ENST00000636767 TRIP6Q15654 476 aaKnown RBP17.94■□□□□ 0.46
CLN5-215ENST00000636767 MDS2Q8NDY4 140 aa17.94■□□□□ 0.46
CLN5-215ENST00000636767 SGMS2Q8NHU3 365 aa17.94■□□□□ 0.46
CLN5-215ENST00000636767 SCGB1D1O95968 90 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 ARL14EPLP0DKL9 152 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 FOSL1P15407 271 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 IGHV1-2P23083 117 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 FOXF2Q12947 444 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 TCF23Q7RTU1 214 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 UBALD2Q8IYN6 164 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 PRR7Q8TB68 274 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 NEU1Q99519 415 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 POLR3KQ9Y2Y1 108 aaPredicted RBP17.93■□□□□ 0.46
CLN5-215ENST00000636767 A0A1W2PNU3 283 aaPredicted RBP17.93■□□□□ 0.46
CLN5-215ENST00000636767 AARDQ4LEZ3 155 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 PRAMEF6Q5VXH4 476 aa17.93■□□□□ 0.46
CLN5-215ENST00000636767 MDFIC2A0A1B0GVS7 189 aa17.92■□□□□ 0.46
CLN5-215ENST00000636767 TCAPO15273 167 aa17.92■□□□□ 0.46
CLN5-215ENST00000636767 LYZL6O75951 148 aa17.92■□□□□ 0.46
CLN5-215ENST00000636767 TREML4Q6UXN2 200 aa17.92■□□□□ 0.46
CLN5-215ENST00000636767 SNHG12Q9BXW3 62 aa17.92■□□□□ 0.46
CLN5-215ENST00000636767 TMEM265A0A087WTH1 108 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 KLRC4-KLRK1H3BQV0 150 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 ADMP35318 185 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 OPRK1P41145 380 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 SOX8P57073 446 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 WDR82Q6UXN9 313 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 SDSLQ96GA7 329 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 CDX2Q99626 313 aaPredicted RBP17.91■□□□□ 0.46
CLN5-215ENST00000636767 MGST2Q99735 147 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 TMEM204Q9BSN7 226 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 DCTN5Q9BTE1 182 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 KIR2DL5BA0A0G2JN68 375 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 KIR2DL5BA0A0G2JPC4 375 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 SCO2A0A1W2PP80 73 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 ZNF891A8MT65 544 aaPredicted RBP17.91■□□□□ 0.46
CLN5-215ENST00000636767 LAMTOR5O43504 91 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 SOX15O60248 233 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 MPDU1O75352 247 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 ZNF124Q15973 351 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 C1orf194Q5T5A4 169 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 TMPRSS7Q7RTY8 843 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 KIR2DL5AQ8N109 375 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 CBLN4Q9NTU7 201 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 NAGKQ9UJ70 344 aa17.91■□□□□ 0.46
CLN5-215ENST00000636767 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.9■□□□□ 0.46
CLN5-215ENST00000636767 RRHO14718 337 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 PROP1O75360 226 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 STAG3L2P0CL84 134 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 STAG3L3P0CL85 134 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 DUTP33316 252 aaKnown RBP17.9■□□□□ 0.46
CLN5-215ENST00000636767 ERVFC1-1P60608 527 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 RNFT1Q5M7Z0 435 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 Q8TCH9 128 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 GGTLC1Q9BX51 225 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 PRSS46E5RG02 174 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 C15orf65H3BRN8 121 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 FCGR3BO75015 233 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 LPAL2Q16609 132 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 LTC4SQ16873 150 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 PRAMEF5Q5TYX0 476 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 MIC13Q5XKP0 118 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 CXXC4Q9H2H0 198 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 MS4A5Q9H3V2 200 aa17.9■□□□□ 0.46
CLN5-215ENST00000636767 HCFC1P51610 2035 aa17.89■□□□□ 0.46
CLN5-215ENST00000636767 C21orf140B9A014 251 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 TNFSF15O95150 251 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 YPEL3P61236 119 aaPredicted RBP17.89■□□□□ 0.45
CLN5-215ENST00000636767 MS4A10Q96PG2 267 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 TXNDC17Q9BRA2 123 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 TRGV5A0A0B4J1U4 118 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 HNF1AP20823 631 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 KITLGP21583 273 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 TIMP3P35625 211 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 TGFBR3Q03167 851 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 ATG101Q9BSB4 218 aa17.89■□□□□ 0.45
CLN5-215ENST00000636767 CXorf1O96002 111 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 VDAC2P45880 294 aaPredicted RBP17.88■□□□□ 0.45
CLN5-215ENST00000636767 GPR12P47775 334 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 PDLIM3Q53GG5 364 aaPredicted RBP17.88■□□□□ 0.45
CLN5-215ENST00000636767 GMPPAQ96IJ6 420 aaPredicted RBP17.88■□□□□ 0.45
CLN5-215ENST00000636767 GRIFINA4D1Z8 144 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 SPINT2O43291 252 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 HPRT1P00492 218 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 RPP30P78346 268 aaKnown RBP17.88■□□□□ 0.45
CLN5-215ENST00000636767 HTD2P86397 168 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 OCC1Q8TAD7 63 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 PLPPR2Q96GM1 343 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 HEYLQ9NQ87 328 aaPredicted RBP17.88■□□□□ 0.45
CLN5-215ENST00000636767 IL17BQ9UHF5 180 aa17.88■□□□□ 0.45
CLN5-215ENST00000636767 YTHDF2Q9Y5A9 579 aaKnown RBP17.88■□□□□ 0.45
CLN5-215ENST00000636767 FAM90A9PA6NNJ1 464 aa17.87■□□□□ 0.45
CLN5-215ENST00000636767 AQP7O14520 342 aa17.87■□□□□ 0.45
CLN5-215ENST00000636767 ADH4P08319 380 aa17.87■□□□□ 0.45
CLN5-215ENST00000636767 OR10J1P30954 320 aa17.87■□□□□ 0.45
CLN5-215ENST00000636767 ZNF718Q3SXZ3 478 aa17.87■□□□□ 0.45
CLN5-215ENST00000636767 VKORC1L1Q8N0U8 176 aa17.87■□□□□ 0.45
CLN5-215ENST00000636767 GCNT2Q8N0V5 402 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms