RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SCXQ7RTU7 201 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 COMMD7Q86VX2 200 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 ZNF664Q8N3J9 261 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 ZFAND2AQ8N6M9 145 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 Q8NAQ8 132 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 CCDC112Q8NEF3 446 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 CD200R1Q8TD46 325 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 HAVCR2Q8TDQ0 301 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 TESCQ96BS2 214 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 TVP23CQ96ET8 276 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 MRPS16Q9Y3D3 137 aaKnown RBP2.26□□□□□ -2.05
CLN5-212ENST00000636602 CACNA1DQ01668 2161 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 DISP2A7MBM2 1401 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 TNS1Q9HBL0 1735 aaKnown RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 ZNF831Q5JPB2 1677 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 IGSF23A1L1A6 192 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 A8MWP6 167 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 C21orf140B9A014 251 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 PSCAO43653 123 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 AHSA1O95433 338 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 NQO1P15559 274 aaKnown RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 CD36P16671 472 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 RPS12P25398 132 aaKnown RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 RPL12P30050 165 aaKnown RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 FABP5Q01469 135 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 EBPQ15125 230 aaKnown RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 CST6Q15828 149 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 N4BP2L1Q5TBK1 243 aaPredicted RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 WDR59Q6PJI9 974 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 RASSF6Q6ZTQ3 369 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 SLC51BQ86UW2 128 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 DNAAF3Q8N9W5 541 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 MFSD8Q8NHS3 518 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 MUC7Q8TAX7 377 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 CMTM2Q8TAZ6 248 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 Q8WTZ3 238 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 EEF1AKMT1Q8WVE0 214 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 RAB8BQ92930 207 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 OR8B2Q96RD0 313 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 HIGD2AQ9BW72 106 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 GNB1LQ9BYB4 327 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 ZNF391Q9UJN7 358 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 VPREB3Q9UKI3 123 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 MCTS1Q9ULC4 181 aaKnown RBP2.25□□□□□ -2.05
CLN5-212ENST00000636602 ALG5Q9Y673 324 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 BTAF1O14981 1849 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 LY75O60449 1722 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 TOGARAM1Q9Y4F4 1720 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 OVOS2A0A0G2JMS6 1433 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 BCL9O00512 1426 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 RGS12O14924 1447 aa2.25□□□□□ -2.05
CLN5-212ENST00000636602 PAPPAQ13219 1627 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 CICQ96RK0 1608 aaPredicted RBP2.24□□□□□ -2.05
CLN5-212ENST00000636602 TAF1LQ8IZX4 1826 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 LAMB4A4D0S4 1761 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 KDM3BQ7LBC6 1761 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 UBR2Q8IWV8 1755 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 C5orf49A4QMS7 147 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 IGLV3-27P01718 113 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 HLA-DRAP01903 254 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 CRYGDP07320 174 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 IL3P08700 152 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 ZNF22P17026 224 aaPredicted RBP2.24□□□□□ -2.05
CLN5-212ENST00000636602 DAPP51397 102 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 AP2S1P53680 142 aaPredicted RBP2.24□□□□□ -2.05
CLN5-212ENST00000636602 SPIN3Q5JUX0 258 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 MSRB3Q8IXL7 192 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 C10orf67Q8IYJ2 551 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 OR2V1Q8NHB1 315 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 LMX1AQ8TE12 382 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 PTH2Q96A98 100 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 RAD51AP1Q96B01 352 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 PARD6GQ9BYG4 376 aaPredicted RBP2.24□□□□□ -2.05
CLN5-212ENST00000636602 MRPS26Q9BYN8 205 aaKnown RBP2.24□□□□□ -2.05
CLN5-212ENST00000636602 BABAM2Q9NXR7 383 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 DKKL1Q9UK85 242 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 POLR1DQ9Y2S0 133 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 QSER1Q2KHR3 1735 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 RREB1Q92766 1687 aa2.24□□□□□ -2.05
CLN5-212ENST00000636602 MAP3K5Q99683 1374 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 COL5A3P25940 1745 aaPredicted RBP2.23□□□□□ -2.05
CLN5-212ENST00000636602 C5P01031 1676 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 MRC1P22897 1456 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 SMIM23A6NLE4 172 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 TGOLN2O43493 480 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 IFNA5P01569 189 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 S100A6P06703 90 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 OPRM1P35372 400 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 CA7P43166 264 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 HLA-DRB3P79483 266 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 JOSD1Q15040 202 aaPredicted RBP2.23□□□□□ -2.05
CLN5-212ENST00000636602 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 MRPL51Q4U2R6 128 aaKnown RBP2.23□□□□□ -2.05
CLN5-212ENST00000636602 LPCAT4Q643R3 524 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 TBX5Q99593 518 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 PKMYT1Q99640 499 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 TMEM109Q9BVC6 243 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 HES4Q9HCC6 221 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 EMC3Q9P0I2 261 aa2.23□□□□□ -2.05
CLN5-212ENST00000636602 PCYT1BQ9Y5K3 369 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms