RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CNBD2Q96M20 576 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 NEDD4LQ96PU5 975 aa13.25□□□□□ -0.29
CLN6-212ENST00000636020 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 ADMP35318 185 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 VMA21Q3ZAQ7 101 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 CCDC58Q4VC31 144 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 IDO2Q6ZQW0 420 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 MOB1BQ7L9L4 216 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 SLC25A42Q86VD7 318 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 NR2C2APQ86WQ0 139 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 CDH26Q8IXH8 852 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 C8orf59Q8N0T1 100 aaPredicted RBP13.24□□□□□ -0.29
CLN6-212ENST00000636020 SETD9Q8NE22 299 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 OR4A5Q8NH83 315 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 HRH4Q9H3N8 390 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 CHMP1AQ9HD42 196 aaPredicted RBP13.24□□□□□ -0.29
CLN6-212ENST00000636020 AASSQ9UDR5 926 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 S4R3C0 116 aa13.24□□□□□ -0.29
CLN6-212ENST00000636020 DMBT1Q9UGM3 2413 aaPredicted RBP13.23□□□□□ -0.29
CLN6-212ENST00000636020 TRBV5-5A0A0J9YX44 114 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 GALP22466 123 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 ELLP55199 621 aaPredicted RBP13.23□□□□□ -0.29
CLN6-212ENST00000636020 PVRIGQ6DKI7 326 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 C19orf35Q6ZS72 473 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 CD300LFQ8TDQ1 290 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 ZNF257Q9Y2Q1 563 aa13.23□□□□□ -0.29
CLN6-212ENST00000636020 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
CLN6-212ENST00000636020 CBX3Q13185 183 aa13.22□□□□□ -0.29
CLN6-212ENST00000636020 C10orf55Q5SWW7 151 aa13.22□□□□□ -0.29
CLN6-212ENST00000636020 FANCD2OSQ96PS1 177 aa13.22□□□□□ -0.29
CLN6-212ENST00000636020 RNF126Q9BV68 326 aa13.22□□□□□ -0.29
CLN6-212ENST00000636020 C6orf62Q9GZU0 229 aaPredicted RBP13.22□□□□□ -0.29
CLN6-212ENST00000636020 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
CLN6-212ENST00000636020 RPL36Q9Y3U8 105 aaKnown RBP13.22□□□□□ -0.29
CLN6-212ENST00000636020 TRBV6-6A0A0A6YYG2 114 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 P0DMU3 169 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 FAM231AP0DMU4 169 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 FAM231CP0DMU5 169 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 GABRB1P18505 474 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 HLA-DRB3P79483 266 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 APRG1Q8IVJ8 170 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 UFC1Q9Y3C8 167 aa13.21□□□□□ -0.29
CLN6-212ENST00000636020 OR4C46A6NHA9 309 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 HMX3A6NHT5 357 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 OGG1O15527 345 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 ACTL6BO94805 426 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 LIMS3P0CW19 117 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 LIMS4P0CW20 117 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 MYOD1P15172 320 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 PSMB6P28072 239 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 RTL8BQ17RB0 113 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 LAIR2Q6ISS4 152 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 Q6ZR54 194 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 CEACAM19Q7Z692 300 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 OR52I1Q8NGK6 324 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 APH1BQ8WW43 257 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 EEF1AKMT3Q96AZ1 226 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 AMBNQ9NP70 447 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 SDHAF2Q9NX18 166 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 RDH8Q9NYR8 311 aa13.2□□□□□ -0.3
CLN6-212ENST00000636020 TRBV5-7A0A0A0MS05 114 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 IGKV1-6A0A0C4DH72 117 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 NPIPB5A8MRT5 1133 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 C16orf90A8MZG2 172 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 CLEC3BP05452 202 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 RRASP10301 218 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 HTR2CP28335 458 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLN6-212ENST00000636020 ZNF124Q15973 351 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 Q499Y3 187 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 Q6ZTC4 211 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 Q8NAQ8 132 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 RHOXF1Q8NHV9 184 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 C5orf30Q96GV9 206 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 HDHD3Q9BSH5 251 aaPredicted RBP13.19□□□□□ -0.3
CLN6-212ENST00000636020 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
CLN6-212ENST00000636020 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
CLN6-212ENST00000636020 A0A1W2PPK0 400 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 WBP4O75554 376 aaKnown RBP13.18□□□□□ -0.3
CLN6-212ENST00000636020 KLK9Q2XQG4 91 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 OR10K2Q6IF99 312 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 SCRT2Q9NQ03 307 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 KLK9Q9UKQ9 250 aa13.18□□□□□ -0.3
CLN6-212ENST00000636020 IGHV3-35A0A0C4DH35 117 aa13.17□□□□□ -0.3
CLN6-212ENST00000636020 CRYZL1O95825 349 aa13.17□□□□□ -0.3
CLN6-212ENST00000636020 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
CLN6-212ENST00000636020 CDK10Q15131 360 aa13.17□□□□□ -0.3
CLN6-212ENST00000636020 UQCC2Q9BRT2 126 aa13.17□□□□□ -0.3
CLN6-212ENST00000636020 OR2D2Q9H210 308 aa13.17□□□□□ -0.3
CLN6-212ENST00000636020 Q9N2K0 584 aa13.17□□□□□ -0.3
CLN6-212ENST00000636020 MRPS18AQ9NVS2 196 aaKnown RBP13.17□□□□□ -0.3
CLN6-212ENST00000636020 MGAT4AQ9UM21 535 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms