RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 BEND2Q8NDZ0 799 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 IGFBPL1Q8WX77 278 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
CLN8-209ENST00000635970 ZNF665Q9H7R5 613 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 NAV2Q8IVL1 2488 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 FAM90A26D6RGX4 464 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 TMEM250H0YL14 139 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 ST8SIA5O15466 376 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 PGA5P0DJD9 388 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 GLRXP35754 106 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 CDKN1AP38936 164 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 TMEM241Q24JQ0 296 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 OR10J5Q8NHC4 309 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 MRPL37Q9BZE1 423 aaKnown RBP12.9□□□□□ -0.34
CLN8-209ENST00000635970 DEGS1O15121 323 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 PFN1P07737 140 aaKnown RBP12.89□□□□□ -0.35
CLN8-209ENST00000635970 PDLIM4P50479 330 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CLN8-209ENST00000635970 PDZD11Q5EBL8 140 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 NCR3LG1Q68D85 454 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 C11orf71Q6IPW1 123 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 DTX2Q86UW9 622 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 ZDHHC23Q8IYP9 409 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 OR4X1Q8NH49 305 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 ANAPC16Q96DE5 110 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 PSENENQ9NZ42 101 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 IGKV1-6A0A0C4DH72 117 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 PRDX4Q13162 271 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 LCN15Q6UWW0 184 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 OR5A2Q8NGI9 324 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 OR1P1Q8NH06 330 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 BTF3L4Q96K17 158 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 RHOVQ96L33 236 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 OR5B12Q96R08 314 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 OR2J1Q9GZK6 312 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
CLN8-209ENST00000635970 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 ZNF469Q96JG9 3925 aaPredicted RBP12.88□□□□□ -0.35
CLN8-209ENST00000635970 CD300LBA8K4G0 201 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 KBTBD11O94819 623 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 MBP02144 154 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 PPP1CBP62140 327 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 ZNF726P1Q15940 193 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 SNX22Q96L94 193 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 RSG1Q9BU20 258 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 WDR61Q9GZS3 305 aaKnown RBP12.88□□□□□ -0.35
CLN8-209ENST00000635970 DUSP13Q9UII6 198 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 OTOGQ6ZRI0 2925 aa12.88□□□□□ -0.35
CLN8-209ENST00000635970 MAP1AP78559 2803 aaPredicted RBP12.88□□□□□ -0.35
CLN8-209ENST00000635970 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 PPP5D1E7EU14 171 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 ZNF737O75373 536 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 METTL15P1P0C7V9 234 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MPV17P39210 176 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MEF2BQ02080 365 aaPredicted RBP12.87□□□□□ -0.35
CLN8-209ENST00000635970 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
CLN8-209ENST00000635970 ATP6V1FQ16864 119 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 LILRB2Q8N423 598 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MRPL30Q8TCC3 161 aaKnown RBP12.87□□□□□ -0.35
CLN8-209ENST00000635970 NINJ1Q92982 152 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 A0A0G2JRQ6 117 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 A8MWP6 167 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 GZMBP10144 247 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 PRSS12P56730 875 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 DEFB113Q30KQ7 82 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 BSXQ3C1V8 233 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 ACOT6Q3I5F7 207 aaPredicted RBP12.87□□□□□ -0.35
CLN8-209ENST00000635970 ALKBH6Q3KRA9 238 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 OR56B2PQ8NGI1 322 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 OR10V1Q8NGI7 309 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MEGF10Q96KG7 1140 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 MANBALQ9NQG1 85 aa12.87□□□□□ -0.35
CLN8-209ENST00000635970 LIN7CQ9NUP9 197 aaKnown RBP12.87□□□□□ -0.35
CLN8-209ENST00000635970 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.86□□□□□ -0.35
CLN8-209ENST00000635970 OVOL3O00110 214 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 NDUFS7O75251 213 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 PSG2P11465 335 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 PSMB3P49720 205 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 EFNB3Q15768 340 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 OR51G1Q8NGK1 321 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 KLF14Q8TD94 323 aaPredicted RBP12.86□□□□□ -0.35
CLN8-209ENST00000635970 TAF15Q92804 592 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLN8-209ENST00000635970 APOBEC3DQ96AK3 386 aaPredicted RBP12.86□□□□□ -0.35
CLN8-209ENST00000635970 PERPQ96FX8 193 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 RBKSQ9H477 322 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 MTCH1Q9NZJ7 389 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 CACNG5Q9UF02 275 aa12.86□□□□□ -0.35
CLN8-209ENST00000635970 CELSR1Q9NYQ6 3014 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms