RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 GVQW1Q8N7I0 195 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 ZBTB34Q8NCN2 500 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 VSTM2AQ8TAG5 236 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 TCTEX1D2Q8WW35 142 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 KCTD12Q96CX2 325 aaKnown RBP14.11□□□□□ -0.15
CLN6-210ENST00000635747 SPIN2AQ99865 258 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 B9D2Q9BPU9 175 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 SPIN2BQ9BPZ2 258 aa14.11□□□□□ -0.15
CLN6-210ENST00000635747 RANGRFQ9HD47 186 aaPredicted RBP14.11□□□□□ -0.15
CLN6-210ENST00000635747 MSGN1A6NI15 193 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 FCGR2CP31995 323 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 KIR2DS2P43631 304 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 SLURP1P55000 103 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 GPR141Q7Z602 305 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 MFSD4AQ8N468 514 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 OR5AP2Q8NGF4 316 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 ACOT12Q8WYK0 555 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 USMG5Q96IX5 58 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 AIFM2Q9BRQ8 373 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 TINAGL1Q9GZM7 467 aaPredicted RBP14.1□□□□□ -0.15
CLN6-210ENST00000635747 IFT46Q9NQC8 304 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 COA4Q9NYJ1 87 aa14.1□□□□□ -0.15
CLN6-210ENST00000635747 ZNF256Q9Y2P7 627 aaPredicted RBP14.1□□□□□ -0.15
CLN6-210ENST00000635747 COL7A1Q02388 2944 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 MPPED1O15442 326 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 SAP30O75446 220 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 SAA1P0DJI8 122 aaPredicted RBP14.09□□□□□ -0.15
CLN6-210ENST00000635747 ZP3P21754 424 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 LSM3P62310 102 aaKnown RBP14.09□□□□□ -0.15
CLN6-210ENST00000635747 RPL30P62888 115 aaKnown RBP14.09□□□□□ -0.15
CLN6-210ENST00000635747 MRGPRG-AS1Q2M3A8 158 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 IDO2Q6ZQW0 420 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 ANKRD13BQ86YJ7 626 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 SECTM1Q8WVN6 248 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 GIMAP1Q8WWP7 306 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 SRSF12Q8WXF0 261 aaKnown RBP14.09□□□□□ -0.15
CLN6-210ENST00000635747 ELOVL1Q9BW60 279 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 FUNDC2Q9BWH2 189 aa14.09□□□□□ -0.15
CLN6-210ENST00000635747 ZNF430Q9H8G1 570 aaPredicted RBP14.09□□□□□ -0.15
CLN6-210ENST00000635747 HRASP01112 189 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 PPYP01298 95 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 OR9G9P0C7N8 305 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 TGFBR1P36897 503 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 EIF4EBP1Q13541 118 aaPredicted RBP14.08□□□□□ -0.16
CLN6-210ENST00000635747 OR2B11Q5JQS5 317 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 TMEM69Q5SWH9 247 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 ACSM6Q6P461 480 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 SAMD12Q8N8I0 201 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 OR6Q1Q8NGQ2 317 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 BORCS5Q969J3 196 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 SLC25A46Q96AG3 418 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 OR4C12Q96R67 309 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 PRR25Q96S07 402 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 BCL7BQ9BQE9 202 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 TAS2R8Q9NYW2 309 aa14.08□□□□□ -0.16
CLN6-210ENST00000635747 OR2A4O95047 310 aa14.07□□□□□ -0.16
CLN6-210ENST00000635747 GABARAPO95166 117 aa14.07□□□□□ -0.16
CLN6-210ENST00000635747 SNAPC3Q92966 411 aa14.07□□□□□ -0.16
CLN6-210ENST00000635747 CMTM3Q96MX0 182 aa14.07□□□□□ -0.16
CLN6-210ENST00000635747 OR2A7Q96R45 310 aa14.07□□□□□ -0.16
CLN6-210ENST00000635747 SLC5A7Q9GZV3 580 aa14.07□□□□□ -0.16
CLN6-210ENST00000635747 LSM4Q9Y4Z0 139 aaKnown RBP14.07□□□□□ -0.16
CLN6-210ENST00000635747 SMIM31A0A1B0GVY4 71 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 LY86O95711 162 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 MAS1LP35410 378 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 CATR1Q13166 79 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 VAX1Q5SQQ9 334 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 ZNF343Q6P1L6 599 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 ADAD2Q8NCV1 583 aaKnown RBP14.06□□□□□ -0.16
CLN6-210ENST00000635747 CCL28Q9NRJ3 127 aa14.06□□□□□ -0.16
CLN6-210ENST00000635747 FAM223BA6NKX1 122 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 RBFOX2O43251 390 aaKnown RBP eCLIP14.05□□□□□ -0.16
CLN6-210ENST00000635747 KBTBD11O94819 623 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 NHLRC4P0CG21 123 aaPredicted RBP14.05□□□□□ -0.16
CLN6-210ENST00000635747 APELAP0DMC3 54 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 PTHLHP12272 177 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 PRSS3P35030 304 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 TAS2R20P59543 309 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 HERV-K104P61576 105 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 TATDN3Q17R31 274 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 DHRS11Q6UWP2 260 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 FAM223AQ8IWN6 122 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 PUSL1Q8N0Z8 303 aaKnown RBP14.05□□□□□ -0.16
CLN6-210ENST00000635747 TTC9CQ8N5M4 171 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 TMEM167AQ8TBQ9 72 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 CD300LFQ8TDQ1 290 aa14.05□□□□□ -0.16
CLN6-210ENST00000635747 PEF1Q9UBV8 284 aaKnown RBP14.05□□□□□ -0.16
CLN6-210ENST00000635747 DNAH9Q9NYC9 4486 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 MEIS3P1A6NDR6 274 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 APOA1P02647 267 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 FCER2P06734 321 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 TMBIM6P55061 237 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 BRWD1-AS2P59051 145 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 TAS2R46P59540 309 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 FXYD4P59646 89 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 FAM209BQ5JX69 171 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 SPAG16Q8N0X2 631 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 OR4A5Q8NH83 315 aa14.04□□□□□ -0.16
CLN6-210ENST00000635747 RAB2BQ8WUD1 216 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms