RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PAX8Q06710 450 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 LOXL1Q08397 574 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-213ENST00000630925 SLC38A11Q08AI6 406 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 GPR18Q14330 331 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 RHEBQ15382 184 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 PYY3Q5JQD4 70 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 GLIPR1L1Q6UWM5 242 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 C1QL2Q7Z5L3 287 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 C6orf223Q8N319 242 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-213ENST00000630925 SLC25A44Q96H78 314 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-213ENST00000630925 PGLYRP4Q96LB8 373 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 MRPL57Q9BQC6 102 aaKnown RBP3.83□□□□□ -1.8
SDCBP-213ENST00000630925 JPT2Q9H910 190 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 PLAC1Q9HBJ0 212 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 BOKQ9UMX3 212 aaPredicted RBP3.83□□□□□ -1.8
SDCBP-213ENST00000630925 VPS13AQ96RL7 3174 aa3.83□□□□□ -1.8
SDCBP-213ENST00000630925 FAM186AA6NE01 2351 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 IGHV3OR16-9A0A0B4J2B5 98 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 C5orf49A4QMS7 147 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 XKRYO14609 159 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 FFAR1O14842 300 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 KCNK2O95069 426 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 CERS1P27544 350 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 CD70P32970 193 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 DEFA3P59666 94 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 DAD1P61803 113 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 INCA1Q0VD86 236 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 LCN8Q6JVE9 175 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SCGB1D4Q6XE38 83 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 Q6ZRU5 148 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 TCF23Q7RTU1 214 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 PRIMA1Q86XR5 153 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 FAM71E2Q8N5Q1 922 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 KRTCAP2Q8N6L1 136 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 DCAF4L2Q8NA75 395 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 ZNRF4Q8WWF5 429 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 TMEM159Q96B96 161 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 TSPAN32Q96QS1 320 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SRXN1Q9BYN0 137 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SCAND2PQ9GZW5 306 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SRMSQ9H3Y6 488 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 LIME1Q9H400 295 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 NOX3Q9HBY0 568 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF224Q9NZL3 707 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 OR5AC2Q9NZP5 309 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 INSIG2Q9Y5U4 225 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 COL4A3Q01955 1670 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 BPTFQ12830 3046 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 C2orf16Q68DN1 1984 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 ANKRD36CQ5JPF3 1778 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 CACNA1HO95180 2353 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 RIIAD1A6NNX1 92 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 C12orf77C9JDV5 145 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 H3BP45 60 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 NDUFS5O43920 106 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 PGLYRP1O75594 196 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-213ENST00000630925 MPC2O95563 127 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 DUS4LO95620 317 aaKnown RBP3.82□□□□□ -1.8
SDCBP-213ENST00000630925 CXorf1O96002 111 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SOD3P08294 240 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 OR4Q2P0C623 313 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 NTF3P20783 257 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 GABRA3P34903 492 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 KLK7P49862 253 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SLC18A1P54219 525 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 FABP5Q01469 135 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 KIAA0040Q15053 153 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 MLF2Q15773 248 aaPredicted RBP3.82□□□□□ -1.8
SDCBP-213ENST00000630925 LRRC10Q5BKY1 277 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 TCTE3Q8IZS6 198 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 SAMD12Q8N8I0 201 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 OR5A2Q8NGI9 324 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 URB1-AS1Q96HZ7 61 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 OR2M4Q96R27 311 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 NRIP2Q9BQI9 281 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 RHNO1Q9BSD3 238 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF747Q9BV97 191 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 ZBP1Q9H171 429 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 GTSF1LQ9H1H1 148 aa3.82□□□□□ -1.8
SDCBP-213ENST00000630925 RIF1Q5UIP0 2472 aaKnown RBP3.81□□□□□ -1.8
SDCBP-213ENST00000630925 NFASCO94856 1347 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 LOC107984640A0A0U1RRK4 108 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 PATE3B3GLJ2 98 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 E9PLD3 99 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 H7BYZ3 331 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 GSC2O15499 205 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 FOXS1O43638 330 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 IL9P15248 144 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 CD1DP15813 335 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 RPL29P47914 159 aaKnown RBP3.81□□□□□ -1.8
SDCBP-213ENST00000630925 ATP5G3P48201 142 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 RAB5CP51148 216 aa3.81□□□□□ -1.8
SDCBP-213ENST00000630925 ZNF140P52738 457 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-213ENST00000630925 GP2P55259 537 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms