RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 USF1P22415 310 aaPredicted RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 HTR1DP28221 377 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 RPL12P30050 165 aaKnown RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 AP2S1P53680 142 aaPredicted RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 KRTAP10-9P60411 292 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 OPCMLQ14982 345 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 POU2AF1Q16633 256 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 KRTAP21-3Q3LHN1 58 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 TMEM177Q53S58 311 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 CXorf66Q5JRM2 361 aaPredicted RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 TPTE2P1Q5T6R2 138 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 MINOS1Q5TGZ0 78 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 GPR157Q5UAW9 335 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 Q6ZRM9 215 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 OR4C13Q8NGP0 309 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 OSR1Q8TAX0 266 aaPredicted RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 LHX4Q969G2 390 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 RPEQ96AT9 228 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 FLYWCH2Q96CP2 140 aaKnown RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 ZC4H2Q9NQZ6 224 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 SIRT7Q9NRC8 400 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 DPM3Q9P2X0 92 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 RCL1Q9Y2P8 373 aaKnown RBP6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 WASHC3Q9Y3C0 194 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 INSIG2Q9Y5U4 225 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 MINOS1-NBL1R4GNA1 71 aa6.12□□□□□ -1.43
PTP4A1-206ENST00000627002 KANTRA0A1W2PQU2 76 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 OOSP1A8MZH6 123 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 FAM157AC9JC47 383 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TAAR5O14804 337 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 SHOXO15266 292 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 BCL2L11O43521 198 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 SYNGR2O43760 224 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 CHST1O43916 411 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TSC22D2O75157 780 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 RBMXL2O75526 392 aaKnown RBP6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 GATA3P23771 443 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 REG1BP48304 166 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 UBE2E1P51965 193 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 LGALS4P56470 323 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TAS2R30P59541 319 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 POLR2GP62487 172 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 RPL23AP62750 156 aaKnown RBP6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 PAX8Q06710 450 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TNFRSF9Q07011 255 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 IZUMO4Q1ZYL8 232 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 AARDQ4LEZ3 155 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 MIDNQ504T8 468 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 HCP5Q6MZN7 132 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 CCDC144NLQ6NUI1 221 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 PRSS57Q6UWY2 283 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 MOB3BQ86TA1 216 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 OR8H3Q8N146 312 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 OR52E5Q8NH55 327 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 OR4A16Q8NH70 328 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 OR4A5Q8NH83 315 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 VSTM2AQ8TAG5 236 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 C1orf159Q96HA4 380 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 RHOVQ96L33 236 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 HARBI1Q96MB7 349 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 ARPC5LQ9BPX5 153 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 SLC25A31Q9H0C2 315 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 C11orf1Q9H5F2 150 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 LPAR2Q9HBW0 351 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 MMP26Q9NRE1 261 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TMEM140Q9NV12 185 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 HSPB7Q9UBY9 170 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 ITGB1BP2Q9UKP3 347 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 PRNDQ9UKY0 176 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 FOXA2Q9Y261 457 aaPredicted RBP6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TBL2Q9Y4P3 447 aaKnown RBP6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 WSB1Q9Y6I7 421 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 FLNCQ14315 2725 aa6.11□□□□□ -1.43
PTP4A1-206ENST00000627002 TEP1Q99973 2627 aaKnown RBP6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 TRAV20A0A0B4J274 112 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 IGHV1-3A0A0C4DH29 117 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 B4DSR2 109 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 RNASEK-C17orf49H0YIS7 233 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 RGS13O14921 159 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 IGKV1-16P04430 117 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 MSMBP08118 114 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 FGF2P09038 288 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 OR9G9P0C7N8 305 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 HKR1P10072 659 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 CD1BP29016 333 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 LGALS7P47929 136 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 CAV2P51636 162 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 DLX1P56177 255 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 SPCS3P61009 180 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 UBE2KP61086 200 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 RPS16P62249 146 aaKnown RBP6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 IFITM2Q01629 132 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 LOXL1Q08397 574 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 KLRD1Q13241 179 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 DIAPH2-AS1Q14236 149 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 VMA21Q3ZAQ7 101 aa6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 PDLIM3Q53GG5 364 aaPredicted RBP6.1□□□□□ -1.43
PTP4A1-206ENST00000627002 OR4A47Q6IF82 309 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms