RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
SGMS1-211ENST00000626236 OR4E1P0C645 316 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 ANXA3P12429 323 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 F2RL1P55085 397 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 DHODHQ02127 395 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 MMDQ15546 238 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 ZNF585BQ52M93 769 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 TMEM177Q53S58 311 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 OSR1Q8TAX0 266 aaPredicted RBP6.8□□□□□ -1.32
SGMS1-211ENST00000626236 CASTOR1Q8WTX7 329 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 ZFAND2BQ8WV99 257 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 RBM14Q96PK6 669 aaKnown RBP6.8□□□□□ -1.32
SGMS1-211ENST00000626236 JMJD8Q96S16 334 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 RNF5Q99942 180 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 TMEM222Q9H0R3 208 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 MTORP42345 2549 aa6.8□□□□□ -1.32
SGMS1-211ENST00000626236 NIPBLQ6KC79 2804 aaeCLIP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 C9orf170A2RU37 121 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 SRRM4A7MD48 611 aaKnown RBP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 SLC25A17O43808 307 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 HRASP01112 189 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 RPA2P15927 270 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 NQO2P16083 231 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 UCP1P25874 307 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 G6PCP35575 357 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 LGALS7P47929 136 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 MECP2P51608 486 aaKnown RBP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 UBA52P62987 128 aaKnown RBP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 DHRS2Q13268 280 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 TMEM187Q14656 261 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 PLGLAQ15195 96 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 PSG5Q15238 335 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 VMA21Q3ZAQ7 101 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 SSX9Q7RTT3 188 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 LYG2Q86SG7 212 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 ZNF695Q8IW36 515 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 VKORC1L1Q8N0U8 176 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 DMBX1Q8NFW5 382 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 OR8H1Q8NGG4 311 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 OR52B4Q8NGK2 314 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 LHFPL5Q8TAF8 219 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 GLYATL2Q8WU03 294 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 R3HDM4Q96D70 268 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 GALNT14Q96FL9 552 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 TSNAXQ99598 290 aaKnown RBP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 RASL11BQ9BPW5 248 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 SEC22CQ9BRL7 303 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 MARVELD1Q9BSK0 173 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 PLEKHA2Q9HB19 425 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 RAB18Q9NP72 206 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 FAM212BQ9NTI7 297 aaPredicted RBP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 C1RLQ9NZP8 487 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 COMMD9Q9P000 198 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 KIAA1456Q9P272 454 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 METTL1Q9UBP6 276 aaKnown RBP6.79□□□□□ -1.32
SGMS1-211ENST00000626236 MOB4Q9Y3A3 225 aa6.79□□□□□ -1.32
SGMS1-211ENST00000626236 A0A0A6YYJ9 748 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 SH2D7A6NKC9 451 aaPredicted RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 MARCH11A6NNE9 402 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 CLDN34H7C241 214 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 RRHO14718 337 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 GPR137BO60478 399 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 NDUFA3O95167 84 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 CDS2O95674 445 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 DHFRP00374 187 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 KRASP01116 189 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 IGLV2-23P01705 113 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 RNASE1P07998 156 aaKnown RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 SAA1P0DJI8 122 aaPredicted RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 UBE2KP61086 200 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 ERVK-16P61578 105 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 SRPXP78539 464 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 OXA1LQ15070 435 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 ANKRD55Q3KP44 614 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 TMEM268Q5VZI3 342 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 OR4A47Q6IF82 309 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 LIN54Q6MZP7 749 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 C16orf82Q7Z2V1 217 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 SELENOHQ8IZQ5 122 aaKnown RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 LGI3Q8N145 548 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 FAM71E2Q8N5Q1 922 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 C5orf56Q8N8D9 126 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 Q8N9W7 124 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 NPBQ8NG41 125 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 RNASE11Q8TAA1 199 aaKnown RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 RHOVQ96L33 236 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 CLCC1Q96S66 551 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 AIFM2Q9BRQ8 373 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 ALX4Q9H161 411 aaPredicted RBP6.78□□□□□ -1.32
SGMS1-211ENST00000626236 FBXL15Q9H469 300 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 TPSG1Q9NRR2 321 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 PLSCR3Q9NRY6 295 aa6.78□□□□□ -1.32
SGMS1-211ENST00000626236 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
SGMS1-211ENST00000626236 TRIM77I1YAP6 450 aa6.77□□□□□ -1.33
SGMS1-211ENST00000626236 M0QZK8 103 aa6.77□□□□□ -1.33
SGMS1-211ENST00000626236 FGF16O43320 207 aa6.77□□□□□ -1.33
SGMS1-211ENST00000626236 PRAF2O60831 178 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms