RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 DEFB124Q8NES8 71 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 NFAM1Q8NET5 270 aaPredicted RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 OR10S1Q8NGN2 331 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 SPSB4Q96A44 273 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 TMEM45BQ96B21 275 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 C14orf144Q96I85 54 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 NEU1Q99519 415 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF71Q9NQZ8 489 aaPredicted RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 RRHO14718 337 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 MAS1LP35410 378 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 TAS2R60P59551 318 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 IGLV3-21P80748 117 aaPredicted RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 SLC25A45Q8N413 288 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 SRXN1Q9BYN0 137 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 HIGD1AQ9Y241 93 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 AMMECR1Q9Y4X0 333 aaPredicted RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 TDRD15B5MCY1 1934 aaKnown RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 USP34Q70CQ2 3546 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 TRIOBPQ9H2D6 2365 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 EP300Q09472 2414 aaPredicted RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 PROB1E7EW31 1015 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 K7N7A8 449 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 MGPP08493 103 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 COX6B1P14854 86 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 GCSHP23434 173 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 RND2P52198 227 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 LSM10Q969L4 123 aaKnown RBP4.81□□□□□ -1.64
ERCC6-213ENST00000624341 GALNT14Q96FL9 552 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 GFI1Q99684 422 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 MYO16Q9Y6X6 1858 aa4.81□□□□□ -1.64
ERCC6-213ENST00000624341 AMY1AP04745 511 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 FOLR2P14207 255 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 HTN1P15515 57 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 HSPE1P61604 102 aaKnown RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 PLAURQ03405 335 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TWIST1Q15672 202 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TMEM177Q53S58 311 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 PSMG3Q9BT73 122 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SLC25A10Q9UBX3 287 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TCF19Q9Y242 345 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 ODAMA1E959 279 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 DPRXA6NFQ7 191 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 KLF7O75840 302 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF735P0CB33 412 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 C8orf88P0DMB2 117 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 LGALS7P47929 136 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CLDN18P56856 261 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 DGAT2L7PQ6IED9 249 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 LINC00114Q6XXX2 140 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CYP2G1PQ6ZSU1 146 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF502Q8TBZ5 544 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SP7Q8TDD2 431 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 HSPB7Q9UBY9 170 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 HS3ST3B1Q9Y662 390 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TP53BP1Q12888 1972 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 IGHV1-45A0A0A0MS14 117 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 IGHMP01871 453 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 FABP2P12104 132 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 BTF3P20290 206 aaKnown RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CKS2P33552 79 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 KIR2DL2P43627 348 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 RPL27AP46776 148 aaKnown RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CALHM1Q8IU99 346 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 EAF1Q96JC9 268 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 DNAJC4Q9NNZ3 241 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 DIDO1Q9BTC0 2240 aaKnown RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 J3QRE1 110 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 GCHFRP30047 84 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 DLX1P56177 255 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 HERVK_113P61574 105 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 RPL8P62917 257 aaKnown RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CENPWQ5EE01 88 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CLDND2Q8NHS1 167 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 RAB1CQ92928 201 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 GRAMD2BQ96HH9 432 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 NABP2Q9BQ15 211 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 LOC107984156A0A0G2JMH3 177 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 LNP1A1A4G5 178 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TMEM189A5PLL7 270 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 LDLRAD4O15165 306 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 FREM3P0C091 2139 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 IGFBP3P17936 291 aaPredicted RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 PLA2G5P39877 138 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SELENOTP62341 195 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 CCL20P78556 96 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 LRRC75BQ2VPJ9 315 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 RIPPLY2Q5TAB7 128 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 ARL17AQ8IVW1 177 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 ARL6IP6Q8N6S5 226 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SMRP1Q8NCR6 262 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 ITLN1Q8WWA0 313 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SMIM12Q96EX1 92 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 PKIBQ9C010 78 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TUBA4BQ9H853 241 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 SDF2L1Q9HCN8 221 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 TNFRSF19Q9NS68 423 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms