RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 KCTD12Q96CX2 325 aaKnown RBP11.44□□□□□ -0.58
LINC00643-205ENST00000623219 S100A16Q96FQ6 103 aaKnown RBP11.44□□□□□ -0.58
LINC00643-205ENST00000623219 RHOVQ96L33 236 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 DCUN1D5Q9BTE7 237 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 IFT46Q9NQC8 304 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 ZNF355PQ9NSJ1 428 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 SCOCQ9UIL1 159 aa11.44□□□□□ -0.58
LINC00643-205ENST00000623219 A0A0G2JLM5 398 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 C13orf42A0A1B0GVH6 325 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 PPYP01298 95 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 HSPB1P04792 205 aaKnown RBP11.43□□□□□ -0.58
LINC00643-205ENST00000623219 PTHLHP12272 177 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 FCGR2CP31995 323 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 TMEM69Q5SWH9 247 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 ZNF429Q86V71 674 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 MMD2Q8IY49 270 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 SAMD12Q8N8I0 201 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 OR5T1Q8NG75 326 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 OR5AP2Q8NGF4 316 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 VSTM2AQ8TAG5 236 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 DLX4Q92988 240 aaPredicted RBP11.43□□□□□ -0.58
LINC00643-205ENST00000623219 FUNDC2Q9BWH2 189 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 TINAGL1Q9GZM7 467 aaPredicted RBP11.43□□□□□ -0.58
LINC00643-205ENST00000623219 ZNF430Q9H8G1 570 aaPredicted RBP11.43□□□□□ -0.58
LINC00643-205ENST00000623219 TAS2R8Q9NYW2 309 aa11.43□□□□□ -0.58
LINC00643-205ENST00000623219 ACTL6BO94805 426 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 ECI1P42126 302 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 KIR2DS2P43631 304 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 TAS2R20P59543 309 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 MFSD4AQ8N468 514 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 ZBTB34Q8NCN2 500 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 SECTM1Q8WVN6 248 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 B9D2Q9BPU9 175 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 COA4Q9NYJ1 87 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
LINC00643-205ENST00000623219 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
LINC00643-205ENST00000623219 MEIS3P1A6NDR6 274 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 MSGN1A6NI15 193 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 MPPED1O15442 326 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 SAP30O75446 220 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 KBTBD11O94819 623 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 NCS1P62166 190 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 CD69Q07108 199 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 ACSM6Q6P461 480 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 ADAD2Q8NCV1 583 aaKnown RBP11.41□□□□□ -0.58
LINC00643-205ENST00000623219 PRR25Q96S07 402 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 SPIN2AQ99865 258 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 SPIN2BQ9BPZ2 258 aa11.41□□□□□ -0.58
LINC00643-205ENST00000623219 RANGRFQ9HD47 186 aaPredicted RBP11.41□□□□□ -0.58
LINC00643-205ENST00000623219 OR2A4O95047 310 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 FCER2P06734 321 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 APELAP0DMC3 54 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 ZP3P21754 424 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 FXYD4P59646 89 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 VBP1P61758 197 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 CATR1Q13166 79 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
LINC00643-205ENST00000623219 GIMAP1Q8WWP7 306 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 BORCS5Q969J3 196 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 CMTM3Q96MX0 182 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 OR2A7Q96R45 310 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 SLC5A7Q9GZV3 580 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 CCL28Q9NRJ3 127 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 EHFQ9NZC4 300 aa11.4□□□□□ -0.58
LINC00643-205ENST00000623219 RBFOX2O43251 390 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00643-205ENST00000623219 TNFSF12O43508 249 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 HRASP01112 189 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 EIF4EP06730 217 aaKnown RBP11.39□□□□□ -0.59
LINC00643-205ENST00000623219 SMIM18P0DKX4 95 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 TAS2R46P59540 309 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 HERV-K104P61576 105 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 DYRK1AQ13627 763 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 TMEM17Q86X19 198 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 VKORC1L1Q8N0U8 176 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 OR6Q1Q8NGQ2 317 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 TMEM167AQ8TBQ9 72 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 GPHA2Q96T91 129 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 AIFM2Q9BRQ8 373 aa11.39□□□□□ -0.59
LINC00643-205ENST00000623219 LSM4Q9Y4Z0 139 aaKnown RBP11.39□□□□□ -0.59
LINC00643-205ENST00000623219 FAM223BA6NKX1 122 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 GABARAPO95166 117 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 APOA1P02647 267 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 NAT1P18440 290 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 PRSS3P35030 304 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 MAS1LP35410 378 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 DEFA5Q01523 94 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 ZNF343Q6P1L6 599 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 ZNF818PQ6ZRF7 136 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 SLC25A42Q86VD7 318 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 FAM223AQ8IWN6 122 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 COMMD3Q9UBI1 195 aa11.38□□□□□ -0.59
LINC00643-205ENST00000623219 TRBV9A0A0B4J1U6 114 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 ANKRD34BA5PLL1 514 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 LY86O95711 162 aa11.37□□□□□ -0.59
LINC00643-205ENST00000623219 RPL27AP46776 148 aaKnown RBP11.37□□□□□ -0.59
LINC00643-205ENST00000623219 ANKRD13BQ86YJ7 626 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms