RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KLF13Q9Y2Y9 288 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 PCYT1BQ9Y5K3 369 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-229ENST00000621897 MIA3Q5JRA6 1907 aa2.44□□□□□ -2.02
BRCA1-229ENST00000621897 NFASCO94856 1347 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 NOS1P29475 1434 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 A0A087WUU8 490 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 MEIKINA0A087WXM9 373 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 PEX7O00628 323 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 TP53I11O14683 189 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 GYPCP04921 128 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 TDGF1P13385 188 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 CTSEP14091 401 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 RPS4Y1P22090 263 aaKnown RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 EVI2AP22794 236 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 NPY1RP25929 384 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 TDGF1P3P51864 188 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 RAP1AP62834 184 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 SELENOWP63302 87 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 MEF2CQ06413 473 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 LOXL1Q08397 574 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 HTR4Q13639 388 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 KCNJ8Q15842 424 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 TAF9Q16594 264 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 LINC00303Q3SY05 128 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 SCGB2B2Q4G0G5 96 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 PRSS54Q6PEW0 395 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ARL9Q6T311 187 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 PLET1Q6UQ28 207 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 RNF165Q6ZSG1 346 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 Q6ZSR6 202 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF429Q86V71 674 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 SGPP2Q8IWX5 399 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ANKRD29Q8N6D5 301 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ACOT12Q8WYK0 555 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 FXYD5Q96DB9 178 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 KCNS1Q96KK3 526 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 PPP3R2Q96LZ3 170 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF382Q96SR6 550 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 LINC01587Q99440 93 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF649Q9BS31 505 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 LXNQ9BS40 222 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM243Q9BU79 118 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 SLC25A2Q9BXI2 301 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 POLR2J2Q9GZM3 115 aaKnown RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 POLR2J3Q9H1A7 115 aaKnown RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 LINC00597Q9H2U6 94 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 CDC42EP4Q9H3Q1 356 aaKnown RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 SLC25A22Q9H936 323 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 CCL28Q9NRJ3 127 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 GNG8Q9UK08 70 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 POMPQ9Y244 141 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 NEUROG3Q9Y4Z2 214 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 F11RQ9Y624 299 aaKnown RBP2.43□□□□□ -2.02
BRCA1-229ENST00000621897 PXMP4Q9Y6I8 212 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 U3KQ87 197 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 BCL9LQ86UU0 1499 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 TTC37Q6PGP7 1564 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 REREQ9P2R6 1566 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 DOCK5Q9H7D0 1870 aa2.43□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF609O15014 1411 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ERBINQ96RT1 1412 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 MYO5BQ9ULV0 1848 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ZNF106Q9H2Y7 1883 aaKnown RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ADGBQ8N7X0 1667 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 THSD7AQ9UPZ6 1657 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TRBV19A0A075B6N1 114 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 hCG_1818297A0A087WSY0 165 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TRAV4A0A0B4J268 109 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 CCL15-CCL14A0A0B4J2E2 113 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 A0A0J9YY10 115 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM269A0A1B0GVZ9 245 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 A0A1B0GX78 115 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 A8MT66 165 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 APOMO95445 188 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 CDS2O95674 445 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 BGLAPP02818 100 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 CHTF8P0CG12 524 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 RPL7P18124 248 aaKnown RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 COX7A1P24310 79 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 INPP1P49441 399 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 MP68P56378 58 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 GRB2P62993 217 aaKnown RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 CAV1Q03135 178 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 PLCXD2Q0VAA5 305 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ADIGQ0VDE8 80 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ENDOGQ14249 297 aaKnown RBP2.42□□□□□ -2.02
BRCA1-229ENST00000621897 SSX1Q16384 188 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 CCL15Q16663 113 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 LRRC10Q5BKY1 277 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TCEAL5Q5H9L2 206 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 UBE2NLQ5JXB2 153 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ACP7Q6ZNF0 438 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 SHISA6Q6ZSJ9 500 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 ATP5L2Q7Z4Y8 100 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 BAP18Q8IXM2 172 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM61Q8N0U2 210 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 TMEM86AQ8N2M4 240 aa2.42□□□□□ -2.02
BRCA1-229ENST00000621897 C12orf45Q8N5I9 185 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms