RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 KPTNQ9Y664 436 aa15.1■□□□□ 0.01
SEMA6C-210ENST00000621728 RNASEK-C17orf49H0YIS7 233 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 DEDDO75618 318 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 GAPDHP04406 335 aaKnown RBP15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 HOXB4P17483 251 aaPredicted RBP15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 OR4P4Q8NGL7 312 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 SAT2Q96F10 170 aaPredicted RBP15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 TBX15Q96SF7 602 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 TMA7Q9Y2S6 64 aaKnown RBP15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 POLR3KQ9Y2Y1 108 aaPredicted RBP15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 ZANQ9Y493 2812 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 LOC105371267A0A1B0GV96 52 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 TOX4O94842 621 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 ARG1P05089 322 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 CR1P17927 2039 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 PAX6P26367 422 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 PRRX1P54821 245 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 FAM74A1Q5RGS3 127 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 OR13D1Q8NGV5 346 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 Q96MF0 132 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 INSIG2Q9Y5U4 225 aa15.09■□□□□ 0.01
SEMA6C-210ENST00000621728 BUB1B-PAK6H3BSN5 160 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 EPHA1P21709 976 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 G6PCP35575 357 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 THBS3P49746 956 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 S100A10P60903 97 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 NMSQ5H8A3 153 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 C1orf122Q6ZSJ8 110 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 TMED3Q9Y3Q3 217 aa15.08■□□□□ 0
SEMA6C-210ENST00000621728 E5RGE8 158 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 KRASP01116 189 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 LHFPL4Q7Z7J7 247 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 BEND2Q8NDZ0 799 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 OR11H6Q8NGC7 330 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 IL22RA2Q969J5 263 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 GPR146Q96CH1 333 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 NSG2Q9Y328 171 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 K7EPK0 472 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 JTBO76095 146 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 HKR1P10072 659 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 ZNF137PP52743 207 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 IL34Q6ZMJ4 242 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 Q6ZRM9 215 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 FAM71E2Q8N5Q1 922 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 LHX4Q969G2 390 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 TMEM186Q96B77 213 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 NABP2Q9BQ15 211 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 PRELID3BQ9Y3B1 194 aa15.07■□□□□ 0
SEMA6C-210ENST00000621728 PRRC2AP48634 2157 aaKnown RBP15.06■□□□□ 0
SEMA6C-210ENST00000621728 DUXBA0A1W2PPF3 345 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 MSGN1A6NI15 193 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 ODF3BA8MYP8 253 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 NXPH3O95157 252 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 MSMBP08118 114 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 VDAC1P21796 283 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 RPL12P30050 165 aaKnown RBP15.06■□□□□ 0
SEMA6C-210ENST00000621728 AKR1C2P52895 323 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 TAGLNQ01995 201 aaKnown RBP15.06■□□□□ 0
SEMA6C-210ENST00000621728 GPR157Q5UAW9 335 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 VKORC1L1Q8N0U8 176 aa15.06■□□□□ 0
SEMA6C-210ENST00000621728 RNASE11Q8TAA1 199 aaKnown RBP15.06■□□□□ 0
SEMA6C-210ENST00000621728 UNKLQ9H9P5 680 aaKnown RBP15.06■□□□□ 0
SEMA6C-210ENST00000621728 IGHV3-72A0A0B4J1Y9 119 aa15.05■□□□□ 0
SEMA6C-210ENST00000621728 IGKV1-16P04430 117 aa15.05■□□□□ 0
SEMA6C-210ENST00000621728 PAX8Q06710 450 aa15.05■□□□□ 0
SEMA6C-210ENST00000621728 TGIF2LXQ8IUE1 241 aa15.05■□□□□ 0
SEMA6C-210ENST00000621728 LY6LH3BQJ8 138 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 SCO1O75880 301 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 SCGB1D2O95969 90 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 IL3RAP26951 378 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 SSX9Q7RTT3 188 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 FOXRED2Q8IWF2 684 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 TCTEX1D1Q8N7M0 179 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 ADTRPQ96IZ2 230 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 ZC4H2Q9NQZ6 224 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 SLC35D1Q9NTN3 355 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 AKAP9Q99996 3911 aa15.05■□□□□ -0
SEMA6C-210ENST00000621728 H0YJW9 148 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 FAM157CP0CG43 387 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 WFDC11Q8NEX6 87 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 R3HDM4Q96D70 268 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 SPIN2AQ99865 258 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 SPIN2BQ9BPZ2 258 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 HILPDAQ9Y5L2 63 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 CCDC168Q8NDH2 2452 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 ITPR3Q14573 2671 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 IGHV3OR16-10A0A075B7F0 116 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 KCNAB3O43448 404 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 BLOC1S1P78537 153 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 LOXL1Q08397 574 aaPredicted RBP15.04■□□□□ -0
SEMA6C-210ENST00000621728 FAM71F2Q6NXP2 309 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 OR1S2Q8NGQ3 325 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 OR4S2Q8NH73 311 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 CD300LFQ8TDQ1 290 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 FAM212BQ9NTI7 297 aaPredicted RBP15.04■□□□□ -0
SEMA6C-210ENST00000621728 HIF1ANQ9NWT6 349 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 CACNG5Q9UF02 275 aa15.04■□□□□ -0
SEMA6C-210ENST00000621728 ZNF469Q96JG9 3925 aaPredicted RBP15.03■□□□□ -0
SEMA6C-210ENST00000621728 B4DSR2 109 aa15.03■□□□□ -0
SEMA6C-210ENST00000621728 RBFOX2O43251 390 aaKnown RBP eCLIP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms