RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 LINC00052Q96N35 136 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 GSX1Q9H4S2 264 aaPredicted RBP8.61□□□□□ -1.03
VPS11-208ENST00000621676 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 PRELID3BQ9Y3B1 194 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 H0Y980 276 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 TPT1P13693 172 aaKnown RBP8.61□□□□□ -1.03
VPS11-208ENST00000621676 C9orf152Q5JTZ5 239 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 LHX4Q969G2 390 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 TIMD4Q96H15 378 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 PATZ1Q9HBE1 687 aaKnown RBP8.61□□□□□ -1.03
VPS11-208ENST00000621676 PLA2G2EQ9NZK7 142 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 DOK5Q9P104 306 aa8.61□□□□□ -1.03
VPS11-208ENST00000621676 A0A0D9SG52 128 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 E5RGE8 158 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 ARG1P05089 322 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 PET100P0DJ07 73 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 PPT1P50897 306 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 OR2F1Q13607 317 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 TMEM88Q6PEY1 159 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 LINC00596Q86U02 117 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 OR13D1Q8NGV5 346 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 AURKAIP1Q9NWT8 199 aaPredicted RBP8.6□□□□□ -1.03
VPS11-208ENST00000621676 ATRQ13535 2644 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 RRHO14718 337 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 SNAPC5O75971 98 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 IGHV3-23P01764 117 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 BAXQ07812 192 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 FBLN7Q53RD9 439 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 MOB1BQ7L9L4 216 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 RAB1CQ92928 201 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 INSIG2Q9Y5U4 225 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 RPS10-NUDT3A0A1W2PQS6 291 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 ZFP92A6NM28 416 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 HMSDA8MTL9 139 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 RAB29O14966 203 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 TOX4O94842 621 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 OR13C7P0DN81 318 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 SFTPCP11686 197 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 ESCO2Q56NI9 601 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 PXDC1Q5TGL8 231 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 WDR25Q64LD2 544 aaPredicted RBP8.6□□□□□ -1.03
VPS11-208ENST00000621676 RUSC1-AS1Q66K80 236 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 TMEM219Q86XT9 240 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 TGIF2LXQ8IUE1 241 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 FAM169BQ8N8A8 192 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 DTD1Q8TEA8 209 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 CABLES2Q9BTV7 478 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 FBXL15Q9H469 300 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 CYTL1Q9NRR1 136 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 PFDN2Q9UHV9 154 aa8.6□□□□□ -1.03
VPS11-208ENST00000621676 SMAD7O15105 426 aaKnown RBP8.59□□□□□ -1.03
VPS11-208ENST00000621676 CT45A6P0DMU7 189 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 CT45A5P0DMU8 189 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 CT45A7P0DMV0 189 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 C4BPBP20851 252 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 ATP6V0CP27449 155 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 LY6EQ16553 131 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 CLEC12BQ2HXU8 276 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 ETV3LQ6ZN32 361 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 ZNF767PQ75MW2 155 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 OR8B3Q8NGG8 313 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 RPEQ96AT9 228 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 LURAP1Q96LR2 239 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 OR8B2Q96RD0 313 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 CCL20P78556 96 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 LDLRAD2Q5SZI1 272 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 SP5Q6BEB4 398 aaPredicted RBP8.59□□□□□ -1.03
VPS11-208ENST00000621676 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 STX12Q86Y82 276 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 STOML3Q8TAV4 291 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 CCL19Q99731 98 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 TMPRSS5Q9H3S3 457 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 C2CD3Q4AC94 2353 aa8.59□□□□□ -1.03
VPS11-208ENST00000621676 H3BTX0 84 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 FCN1O00602 326 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 CNIH1O95406 144 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 ADH4P08319 380 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 ECI1P42126 302 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 UCP3P55916 312 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.04
VPS11-208ENST00000621676 SLC38A11Q08AI6 406 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 BTN1A1Q13410 526 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 OR4A47Q6IF82 309 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 SCARB1Q8WTV0 552 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 OR4C12Q96R67 309 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 SPIN2AQ99865 258 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 SPIN2BQ9BPZ2 258 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 SLC25A22Q9H936 323 aa8.59□□□□□ -1.04
VPS11-208ENST00000621676 RPUSD1Q9UJJ7 312 aaKnown RBP8.59□□□□□ -1.04
VPS11-208ENST00000621676 PAX9P55771 341 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 UBE2G2P60604 165 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 TNXAQ16473 311 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 MIDNQ504T8 468 aa8.58□□□□□ -1.04
VPS11-208ENST00000621676 Q71RC1 249 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms