RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 SNCAP37840 140 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 PKIAP61925 76 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 RPS10P5Q9NQ39 176 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 FAM157AC9JC47 383 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 M0R1X1 148 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 IFNA10P01566 189 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 HOXA5P20719 270 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 SCRT1Q9BWW7 348 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 ZNF665Q9H7R5 613 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 HSPB7Q9UBY9 170 aa17.59■□□□□ 0.41
LIME1-210ENST00000621325 LRRC30A6NM36 301 aa17.58■□□□□ 0.41
LIME1-210ENST00000621325 SFTA3P0C7M3 94 aa17.58■□□□□ 0.41
LIME1-210ENST00000621325 S100A2P29034 98 aa17.58■□□□□ 0.41
LIME1-210ENST00000621325 TLE1Q04724 770 aa17.58■□□□□ 0.41
LIME1-210ENST00000621325 CLN8Q9UBY8 286 aa17.58■□□□□ 0.41
LIME1-210ENST00000621325 KBTBD11-OT1A0A1B0GTJ5 212 aa17.58■□□□□ 0.4
LIME1-210ENST00000621325 FCGR3BO75015 233 aa17.58■□□□□ 0.4
LIME1-210ENST00000621325 DVL1P1P54792 670 aaPredicted RBP17.58■□□□□ 0.4
LIME1-210ENST00000621325 TEX36Q5VZQ5 186 aa17.58■□□□□ 0.4
LIME1-210ENST00000621325 OR10D4PQ8NGN7 298 aa17.58■□□□□ 0.4
LIME1-210ENST00000621325 SHISA9B4DS77 424 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 FAM90A26D6RGX4 464 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 DAOP14920 347 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 TNFRSF1AP19438 455 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 SPINK9Q5DT21 86 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 H2BFWTQ7Z2G1 175 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 RBMXL1Q96E39 390 aaKnown RBP17.57■□□□□ 0.4
LIME1-210ENST00000621325 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.57■□□□□ 0.4
LIME1-210ENST00000621325 TSTD3H0UI37 97 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 TMPRSS2O15393 492 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 CD55P08174 381 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 UCNP55089 124 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 COTL1Q14019 142 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 CT45A1Q5HYN5 189 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 THNSL2Q86YJ6 484 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 ZNF525Q8N782 197 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 CT45A3Q8NHU0 189 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 ZDHHC16Q969W1 377 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 GAR1Q9NY12 217 aaKnown RBP17.57■□□□□ 0.4
LIME1-210ENST00000621325 FBXO7Q9Y3I1 522 aa17.57■□□□□ 0.4
LIME1-210ENST00000621325 TRGV10A0A0A0MS01 117 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 E7EQL1 145 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 MMP23AO75900 390 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 DFFBO76075 338 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 CDX1P47902 265 aaPredicted RBP17.56■□□□□ 0.4
LIME1-210ENST00000621325 TCTEX1D1Q8N7M0 179 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 GNPNAT1Q96EK6 184 aaPredicted RBP17.56■□□□□ 0.4
LIME1-210ENST00000621325 NCOR1P1Q9H4R4 102 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 SOX15O60248 233 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 TAS2R30P59541 319 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 CCL20P78556 96 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 R3HDM4Q96D70 268 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 RSG1Q9BU20 258 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 SAP30LQ9HAJ7 183 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 TANC2Q9HCD6 1990 aa17.56■□□□□ 0.4
LIME1-210ENST00000621325 CHD8Q9HCK8 2581 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 RAB29O14966 203 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 ZG16O60844 167 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 ERVFRD-1P60508 538 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 GUK1Q16774 197 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 AARDQ4LEZ3 155 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 SLC25A24Q6NUK1 477 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 FAM24BQ8N5W8 94 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 UMAD1C9J7I0 102 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 RBMXL2O75526 392 aaKnown RBP17.55■□□□□ 0.4
LIME1-210ENST00000621325 IFNA5P01569 189 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 VKORC1L1Q8N0U8 176 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 OR4C12Q96R67 309 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 DIRC2Q96SL1 478 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 SIRT7Q9NRC8 400 aa17.55■□□□□ 0.4
LIME1-210ENST00000621325 FAM90A27PA6NNH2 459 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 EREGO14944 169 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 FCN3O75636 299 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 OR9G9P0C7N8 305 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 GRNP28799 593 aaKnown RBP17.54■□□□□ 0.4
LIME1-210ENST00000621325 RPS16P62249 146 aaKnown RBP17.54■□□□□ 0.4
LIME1-210ENST00000621325 OR8G2PQ6IF36 304 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 SPNS3Q6ZMD2 512 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 CCL17Q92583 94 aa17.54■□□□□ 0.4
LIME1-210ENST00000621325 YLPM1P49750 1951 aaKnown RBP17.53■□□□□ 0.4
LIME1-210ENST00000621325 RAB4AP20338 218 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 TMEM14EPQ6UXP3 125 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 LINC01560Q8TB33 94 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 RNASE6Q93091 150 aaKnown RBP17.53■□□□□ 0.4
LIME1-210ENST00000621325 EIF5A2Q9GZV4 153 aaKnown RBP17.53■□□□□ 0.4
LIME1-210ENST00000621325 SNRNP70P08621 437 aaKnown RBP17.53■□□□□ 0.4
LIME1-210ENST00000621325 CA7P43166 264 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 SPSB3Q6PJ21 355 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 SSX8Q7RTT4 187 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 QTRT1Q9BXR0 403 aaKnown RBP17.53■□□□□ 0.4
LIME1-210ENST00000621325 NGBQ9NPG2 151 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 LAMP3Q9UQV4 416 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 NCOR2Q9Y618 2525 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 HCFC1P51610 2035 aa17.53■□□□□ 0.4
LIME1-210ENST00000621325 SAA2-SAA4A0A096LPE2 208 aa17.52■□□□□ 0.4
LIME1-210ENST00000621325 SAA2P0DJI9 122 aaPredicted RBP17.52■□□□□ 0.4
LIME1-210ENST00000621325 NDUFA6P56556 154 aa17.52■□□□□ 0.4
LIME1-210ENST00000621325 PRAMEF5Q5TYX0 476 aa17.52■□□□□ 0.4
LIME1-210ENST00000621325 COMMD1Q8N668 190 aa17.52■□□□□ 0.4
LIME1-210ENST00000621325 CD300LFQ8TDQ1 290 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms