RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 LYRM7Q5U5X0 104 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 OR5P3Q8WZ94 311 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 VAX2Q9UIW0 290 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 RBBP6Q7Z6E9 1792 aaKnown RBP8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 KBTBD11O94819 623 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 IGHV1-2P23083 117 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 HIST3H3Q16695 136 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNF841Q6ZN19 808 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 ISLRO14498 428 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 UBE2V2Q15819 145 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 RGP1Q92546 391 aaPredicted RBP8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 HSPB7Q9UBY9 170 aa8.34□□□□□ -1.07
CLTCL1-211ENST00000621271 PROB1E7EW31 1015 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 TM4SF5O14894 197 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 GGCTO75223 188 aaKnown RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 RCC1P18754 421 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 SULT1A2P50226 295 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 FUT5Q11128 374 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 Q5BKY6 102 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 MRPL54Q6P161 138 aaKnown RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF343Q6P1L6 599 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 C20orf204Q6ZNR8 217 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 PPP1R27Q86WC6 154 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 WDFY1Q8IWB7 410 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 OR5AU1Q8NGC0 362 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 MRPS18CQ9Y3D5 142 aaKnown RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 NEUROG3Q9Y4Z2 214 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 A0A1W2PP11 408 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 KLF7O75840 302 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 ERVS71-1P61550 626 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 COLCA1Q6ZS62 124 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 RFLNBQ8N5W9 214 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM216BQ8N7L0 139 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 AMELYQ99218 206 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 NPIPB13A6NJU9 1138 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 NPIPB4C9JG80 1138 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 SIGLEC5O15389 551 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 ZIC3O60481 467 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 WDR25Q64LD2 544 aaPredicted RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 ANAPC16Q96DE5 110 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 GALNT14Q96FL9 552 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 OR51M1Q9H341 326 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 KCNE5Q9UJ90 142 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 TDRD6O60522 2096 aaKnown RBP8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 MARCH11A6NNE9 402 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 SSTR5P35346 364 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 COTL1Q14019 142 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 PTPRFP10586 1907 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 M0R2Z0 102 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 M0R3E3 92 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF253O75346 499 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 CX3CL1P78423 397 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 UNC119Q13432 240 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM159AQ6UWV7 190 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 FGFRL1Q8N441 504 aa8.33□□□□□ -1.08
CLTCL1-211ENST00000621271 MIA3Q5JRA6 1907 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 NTN3O00634 580 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF324O75467 553 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 H2BFSP57053 126 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 DHRS11Q6UWP2 260 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 SLC25A28Q96A46 364 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 SH3BGRL3Q9H299 93 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM206AQ9NX38 181 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 IGHV3OR16-13A0A075B7E8 117 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 IGHV3-74A0A0B4J1X5 117 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 MEF2CQ06413 473 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM201AQ5SY85 155 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM166AQ6J272 317 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 SSC4DQ8WTU2 575 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 RSG1Q9BU20 258 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 FBXL7Q9UJT9 491 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 ABCA7Q8IZY2 2146 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF236Q9UL36 1845 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 TRBV5-5A0A0J9YX44 114 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 SNURFLB1AK76 121 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 IL4P05112 153 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 UQCRFS1P47985 274 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 NSUN5P1Q3KNT7 163 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 OR4A47Q6IF82 309 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 ACP7Q6ZNF0 438 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 FBXL15Q9H469 300 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 TDRD15B5MCY1 1934 aaKnown RBP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 PGPA6NDG6 321 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 CRYBA2P53672 197 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 DLX6P56179 175 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 HERPUD1Q15011 391 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 VAX1Q5SQQ9 334 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 OR1N2Q8NGR9 330 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 AQP3Q92482 292 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 TMEM222Q9H0R3 208 aa8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
CLTCL1-211ENST00000621271 SCN10AQ9Y5Y9 1956 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 LOC102723996A0A087X1L8 192 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms