RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 DEFB136Q30KP8 78 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 FAM74A1Q5RGS3 127 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 C9orf66Q5T8R8 295 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 AADACL3Q5VUY0 350 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 AWAT2Q6E213 333 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 LIN54Q6MZP7 749 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 TEX38Q6PEX7 206 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 SLC35E3Q7Z769 313 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 ARRDC1Q8N5I2 433 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 C5orf56Q8N8D9 126 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 OR8U1Q8NH10 309 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 OR4K15Q8NH41 348 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 MARCH1Q8TCQ1 289 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 RRNAD1Q96FB5 475 aaKnown RBP6.16□□□□□ -1.42
CLK1-215ENST00000621181 RAX2Q96IS3 184 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 SPACA5Q96QH8 159 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 PHB2Q99623 299 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 RTBDNQ9BSG5 229 aaPredicted RBP6.16□□□□□ -1.42
CLK1-215ENST00000621181 TM2D1Q9BX74 207 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 NMES1Q9C002 83 aa6.16□□□□□ -1.42
CLK1-215ENST00000621181 SEBOXQ9HB31 216 aaPredicted RBP6.16□□□□□ -1.42
CLK1-215ENST00000621181 ODAMA1E959 279 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 MPTX1A8MV57 137 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 SEC14L6B5MCN3 397 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 LY6LH3BQJ8 138 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 DNASE2O00115 360 aaPredicted RBP6.15□□□□□ -1.42
CLK1-215ENST00000621181 CA11O75493 328 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 SFT2D2O95562 160 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 OR2H2O95918 312 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 ZNF44P15621 663 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 ZNF20P17024 532 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 PSMB6P28072 239 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 MTCP1P56278 107 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 TAS2R31P59538 309 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 BTN1A1Q13410 526 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 HNF4GQ14541 408 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 ACTBL2Q562R1 376 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 PAN3Q58A45 887 aaKnown RBP6.15□□□□□ -1.42
CLK1-215ENST00000621181 TMEM128Q5BJH2 165 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 THNSL2Q86YJ6 484 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 DRAM1Q8N682 238 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 OR5AP2Q8NGF4 316 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 OR10K1Q8NGX5 313 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 OR9G1Q8NH87 305 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 CORO2AQ92828 525 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 RAB3CQ96E17 227 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 ARHGAP5-AS1Q96IT6 56 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 IFT46Q9NQC8 304 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 MBD2Q9UBB5 411 aa6.15□□□□□ -1.42
CLK1-215ENST00000621181 AMMECR1Q9Y4X0 333 aaPredicted RBP6.15□□□□□ -1.42
CLK1-215ENST00000621181 A0A087X0M5 115 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 A0A1B0GX30 115 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 KANTRA0A1W2PQU2 76 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 LY86O95711 162 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 IGHV3-7P01780 117 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 CHATP28329 748 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 ATXN7L3Q14CW9 347 aaPredicted RBP6.15□□□□□ -1.43
CLK1-215ENST00000621181 ANKRD55Q3KP44 614 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 CXorf66Q5JRM2 361 aaPredicted RBP6.15□□□□□ -1.43
CLK1-215ENST00000621181 KRBOX4Q5JUW0 171 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 LCNL1Q6ZST4 164 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 OR56B1Q8NGI3 324 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 PP6455Q8WZ26 134 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 C10orf35Q96D05 121 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 RCHY1Q96PM5 261 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 TMEM59Q9BXS4 323 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 BANF2Q9H503 90 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 COMMD9Q9P000 198 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 GHRLQ9UBU3 117 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 ZNF256Q9Y2P7 627 aaPredicted RBP6.15□□□□□ -1.43
CLK1-215ENST00000621181 SMAD5-AS1Q9Y6J3 95 aa6.15□□□□□ -1.43
CLK1-215ENST00000621181 RAB19A4D1S5 217 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A18PA6NE21 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A16PA6NEW6 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A20PA6NIJ5 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 ZNF729A6NN14 1252 aaPredicted RBP6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A9PA6NNJ1 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 NCBP2LA6PVI3 153 aaKnown RBP6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A12PA8MX19 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A5PA8MXJ8 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 AP4M1O00189 453 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 IGKV1D-33P01593 117 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 IGKV1-33P01594 117 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 IGHG2P01859 326 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 RPLP1P05386 114 aaKnown RBP6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A15PP0C7V4 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A13PP0C7W8 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A14PP0C7W9 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 FAM90A24PP0C7X0 464 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 AKR1C4P17516 323 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 GLP1RP43220 463 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 CBX5P45973 191 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 KISS1Q15726 138 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 C10orf91Q5T1B1 145 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 UTF1Q5T230 341 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 UQCC3Q6UW78 93 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 ZNF565Q8N9K5 539 aa6.14□□□□□ -1.43
CLK1-215ENST00000621181 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.14□□□□□ -1.43
CLK1-215ENST00000621181 CCDC54Q8NEL0 328 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms