RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CD8AP01732 235 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 PLNP26678 52 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF562Q6V9R5 426 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 OR51G1Q8NGK1 321 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 RAX2Q96IS3 184 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 MEGF9Q9H1U4 602 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 BEX4Q9NWD9 120 aaPredicted RBP6.21□□□□□ -1.42
COLCA1-205ENST00000620864 FRRS1LQ9P0K9 344 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 GFERP55789 205 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 PSG2P11465 335 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 RPS27P42677 84 aaKnown RBP6.21□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF79Q15937 498 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 FMC1Q96HJ9 113 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 TRBV7-9A0A0J9YWB2 115 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 LMO7DNF2Z398 122 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 SOX8P57073 446 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 RND3P61587 244 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 SPINK9Q5DT21 86 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 GATAD1Q8WUU5 269 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 TMUB1Q9BVT8 246 aa6.21□□□□□ -1.42
COLCA1-205ENST00000620864 TRAV9-2A0A087WT02 112 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 J3KRW8 73 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 IGLV3-27P01718 113 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF324BQ6AW86 544 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 EP300Q09472 2414 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 HOXA3O43365 443 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 CLDN14O95500 239 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 OR10J3Q5JRS4 329 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 MORN3Q6PF18 240 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 SSC5DA1L4H1 1573 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 WNT5AP41221 380 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 RHOGP84095 191 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 CYP2G1PQ6ZSU1 146 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 RFESDQ8TAC1 157 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 PRSS27Q9BQR3 290 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 SLC25A15Q9Y619 301 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 UBR3Q6ZT12 1888 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 IGHV3OR16-12A0A075B7B8 117 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 SOCS1O15524 211 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 TSPO2Q5TGU0 170 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 SAXO1Q8IYX7 474 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 CHCHD1Q96BP2 118 aaKnown RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM160Q9NX00 188 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 IL36RNQ9UBH0 155 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 GGTLC3B5MD39 225 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 PPBPP02775 128 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 PAX2Q02962 417 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 BIVMQ86UB2 503 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 APCDD1LQ8NCL9 501 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 GNRHR2Q96P88 292 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 POLR2AP24928 1970 aaKnown RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 TRBV20OR9-2A0A075B6H5 130 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 MEX3AA1L020 520 aaKnown RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 A8MXK9 166 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 ZNF146Q15072 292 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 NKG7Q16617 165 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 C2orf68Q2NKX9 166 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 ACSF3Q4G176 576 aaPredicted RBP6.2□□□□□ -1.42
COLCA1-205ENST00000620864 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 ORAOV1Q8WV07 137 aa6.2□□□□□ -1.42
COLCA1-205ENST00000620864 A0A1B0GUT8 65 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 IGLV3-25P01717 112 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 C1QTNF9P0C862 333 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 IGFBP6P24592 240 aaPredicted RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 RPL27AP46776 148 aaKnown RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 OR2H1Q9GZK4 316 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 OTOFQ9HC10 1997 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ZDBF2Q9HCK1 2354 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 UBE2CO00762 179 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ETHE1O95571 254 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 INO80CQ6PI98 192 aaPredicted RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 NPDC1Q9NQX5 325 aaPredicted RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 GPR132Q9UNW8 380 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 NUP214P35658 2090 aaPredicted RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 A0A1W2PRS3 328 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ARL14EPLP0DKL9 152 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 CTLA4P16410 223 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ERVK11-1P61568 191 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 RPL8P62917 257 aaKnown RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ORMDL3Q8N138 153 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 CIARTQ8N365 385 aaPredicted RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 RNF182Q8N6D2 247 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 CT55Q8WUE5 264 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 SRSF12Q8WXF0 261 aaKnown RBP6.19□□□□□ -1.42
COLCA1-205ENST00000620864 PCOLCE2Q9UKZ9 415 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 TMSB15BA0A087X1C1 80 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 TRAV8-6A0A0B4J262 113 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 PAX1P15863 534 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 PLPPR1Q8TBJ4 325 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ANK1P16157 1881 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ASPDHA6ND91 283 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 PGPA6NDG6 321 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ESDP10768 282 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 SSPNQ14714 243 aa6.19□□□□□ -1.42
COLCA1-205ENST00000620864 ZFP64Q9NPA5 681 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms