RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 LGALS7P47929 136 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 PDCD1Q15116 288 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 KRTCAP3Q53RY4 240 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 C11orf94C9JXX5 98 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 SPINK4O60575 86 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 NAPSAO96009 420 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 RBPJQ06330 500 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 EIF3IQ13347 325 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 PNKDQ8N490 385 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 SFRP2Q96HF1 295 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 PSMG3Q9BT73 122 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 TM2D1Q9BX74 207 aa13.35□□□□□ -0.27
SEMA3B-214ENST00000619119 NEURL1O76050 574 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 ARG2P78540 354 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 PAX2Q02962 417 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 TAAR3PQ9P1P4 343 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 C21orf140B9A014 251 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 NUDT3O95989 172 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 PPYP01298 95 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 NTF4P34130 210 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 FUT6P51993 359 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 ARF6P62330 175 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 SERF2P84101 59 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 Q56UQ5 140 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 NMSQ5H8A3 153 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 CRIP3Q6Q6R5 217 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 GGNQ86UU5 652 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 OR2M7Q8NG81 312 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 F5H5K5 113 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 SLC17A3O00476 420 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 NDUFB4O95168 129 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 PRRX1P54821 245 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 OR1C1Q15619 314 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 OR4C12Q96R67 309 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 ULBP2Q9BZM5 246 aa13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 WDR61Q9GZS3 305 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-214ENST00000619119 FRYQ5TBA9 3013 aa13.33□□□□□ -0.27
SEMA3B-214ENST00000619119 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 VSTM5A8MXK1 200 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 IGLL1P15814 213 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 SRSF6Q13247 344 aaKnown RBP13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 HIST3H3Q16695 136 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 OR1K1Q8NGR3 316 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 NEUROG1Q92886 237 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 BORCS7Q96B45 105 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 TRAV8-6A0A0B4J262 113 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 A0A1W2PS18 150 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 SPRY1O43609 319 aaPredicted RBP13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 CA2P00918 260 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 VDAC1P21796 283 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 ZNF83P51522 516 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 CLDN15P56746 228 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 ACSM6Q6P461 480 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 VASH2Q86V25 355 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 ABHD14BQ96IU4 210 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 KCNS1Q96KK3 526 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 Q96M66 194 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 BOD1L1Q8NFC6 3051 aa13.33□□□□□ -0.28
SEMA3B-214ENST00000619119 RAC3P60763 192 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 Q0VG73 95 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 LRRC75BQ2VPJ9 315 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 OR1B1Q8NGR6 318 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 S1PR2O95136 353 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 PATE4P0C8F1 98 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 S100GP29377 79 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 GNB1P62873 340 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 LOC102725191A0A1B0GVB3 256 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 E9PLN8 166 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 MAGEA5P43359 124 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 ATP5G3P48201 142 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 OR4S2Q8NH73 311 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 SSC4DQ8WTU2 575 aa13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 BOKQ9UMX3 212 aaPredicted RBP13.32□□□□□ -0.28
SEMA3B-214ENST00000619119 MUC6Q6W4X9 2439 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 DHHO43323 396 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 ZNF324O75467 553 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 FTH1P19P0C7X4 201 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 MSR1P21757 451 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 FAM71F2Q6NXP2 309 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 DOK3Q7L591 496 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 GAPTQ8N292 157 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 GMPPAQ96IJ6 420 aaPredicted RBP13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 PSENENQ9NZ42 101 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 PRSS12P56730 875 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 OR10G8Q8NGN5 311 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 PNRC2Q9NPJ4 139 aaKnown RBP13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 SLC7A10Q9NS82 523 aa13.31□□□□□ -0.28
SEMA3B-214ENST00000619119 ZNF292O60281 2723 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms