RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DTD1Q8TEA8 209 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 TAAR3PQ9P1P4 343 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 SHANK1Q9Y566 2161 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 A0A1W2PR80 420 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 CCL2P13500 99 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 CDC34P49427 236 aaPredicted RBP5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 FOXG1P55316 489 aaPredicted RBP5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 GNG3P63215 75 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 CEACAM21Q3KPI0 293 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM42Q69YG0 159 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 Q6ZS92 163 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 SAXO1Q8IYX7 474 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 RNASEH2CQ8TDP1 164 aaKnown RBP5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM45BQ96B21 275 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 ATG101Q9BSB4 218 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 CFAP47Q6ZTR5 3102 aa5.9□□□□□ -1.47
SRGAP3-213ENST00000618999 A4D1N5 150 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 IGHG3P01860 377 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 NUTF2P61970 127 aaKnown RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 RANP62826 216 aaKnown RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF90Q03938 601 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 CRIP3Q6Q6R5 217 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 IGFL3Q6UXB1 125 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 H2BFWTQ7Z2G1 175 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 LINC00596Q86U02 117 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF808Q8N4W9 903 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 RBMXL3Q8N7X1 1067 aaKnown RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 CMTM2Q8TAZ6 248 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 NAGKQ9UJ70 344 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 NBASA2RRP1 2371 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 NXPH2O95156 264 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 SELLP14151 372 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 LMO1P25800 156 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 CEACAM6P40199 344 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF816Q0VGE8 651 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 TBR1Q16650 682 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 OR5A2Q8NGI9 324 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 OR51G1Q8NGK1 321 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 CDH20Q9HBT6 801 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 PEMTQ9UBM1 199 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 DCHS1Q96JQ0 3298 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 FRYQ5TBA9 3013 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 NCOA6Q14686 2063 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 TRAV39A0A0B4J263 110 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 K7ENP7 123 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 BTF3P20290 206 aaKnown RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 TMPRSS3P57727 454 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 ERVFC1-1P60608 527 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 HTD2P86397 168 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 SRSF7Q16629 238 aaKnown RBP eCLIP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 TMEM183BQ1AE95 376 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 INO80CQ6PI98 192 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 Q6ZS49 121 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 C5orf24Q7Z6I8 188 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 PERPQ96FX8 193 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 GMPPAQ96IJ6 420 aaPredicted RBP5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 TBX15Q96SF7 602 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 RNF115Q9Y4L5 304 aa5.89□□□□□ -1.47
SRGAP3-213ENST00000618999 CHD8Q9HCK8 2581 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 OR5B21A6NL26 309 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 VENTXO95231 258 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 NAPSAO96009 420 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 MT-CO2P00403 227 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 CD55P08174 381 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 BMP5P22003 454 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 PAX9P55771 341 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 TGFBR3Q03167 851 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 MRPL49Q13405 166 aaKnown RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 Q5PR19 223 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 FBXW9Q5XUX1 488 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 Q6ZSR3 168 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 FGFBP3Q8TAT2 258 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 ZNF488Q96MN9 340 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 WFIKKN1Q96NZ8 548 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 VAMP8Q9BV40 100 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 ELOVL1Q9BW60 279 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 IL36RNQ9UBH0 155 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 POLDIP2Q9Y2S7 368 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 TIMM9Q9Y5J7 89 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 DMXL2Q8TDJ6 3036 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 A0A0G2JRQ6 117 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 FAM90A26D6RGX4 464 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 SYNGR1O43759 233 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 PDE6DO43924 150 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 ARR3P36575 388 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 UBE2NP61088 152 aaKnown RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 LCN2P80188 198 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 AGMATQ9BSE5 352 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 RTL8AQ9BWD3 113 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 MRPL37Q9BZE1 423 aaKnown RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 LINC00470Q9BZP3 86 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 AURKAIP1Q9NWT8 199 aaPredicted RBP5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 OR6C3Q9NZP0 311 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 OR1A1Q9P1Q5 309 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 AHRRA9YTQ3 701 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 IFNL4K9M1U5 179 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 SLC25A17O43808 307 aa5.88□□□□□ -1.47
SRGAP3-213ENST00000618999 SOX15O60248 233 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms