RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TRAV3A0A0B4J244 114 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 ZFP92A6NM28 416 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 HBG1P69891 147 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 HBG2P69892 147 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 C17orf58Q2M2W7 97 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
CIITA-212ENST00000618207 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 FAM90A27PA6NNH2 459 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 CFHR2P36980 270 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 C14orf79Q96F83 325 aa10.26□□□□□ -0.77
CIITA-212ENST00000618207 TRGV10A0A0A0MS01 117 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 AWAT1Q58HT5 328 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 CT45A1Q5HYN5 189 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 CT45A3Q8NHU0 189 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 RND1Q92730 232 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 GAFA1Q96PS6 74 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 PBDC1Q9BVG4 233 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 IFI27L2Q9H2X8 130 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 OR6C3Q9NZP0 311 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 GNG13Q9P2W3 67 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 HSPB7Q9UBY9 170 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 JPT1Q9UK76 154 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 RALYQ9UKM9 306 aaKnown RBP10.25□□□□□ -0.77
CIITA-212ENST00000618207 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 PIGBOS1A0A0B4J2F0 54 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 RBFOX3A6NFN3 312 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 OPN1MWP04001 364 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 OPN1MW2P0DN77 364 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 OPN1MW3P0DN78 364 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 GRNP28799 593 aaKnown RBP10.25□□□□□ -0.77
CIITA-212ENST00000618207 SSX7Q7RTT5 188 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 LINC01560Q8TB33 94 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 Q8TCH9 128 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 HINT2Q9BX68 163 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 C17orf100A8MU93 164 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 LBHQ53QV2 105 aaPredicted RBP10.25□□□□□ -0.77
CIITA-212ENST00000618207 STUMQ69YW2 141 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 ZNF66Q6ZN08 573 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 ZFP82Q8N141 532 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 ZNF561Q8N587 486 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 H1FXQ92522 213 aaKnown RBP10.25□□□□□ -0.77
CIITA-212ENST00000618207 CLCC1Q96S66 551 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 S1PR3Q99500 378 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 ZNF665Q9H7R5 613 aa10.25□□□□□ -0.77
CIITA-212ENST00000618207 ARHGAP32A7KAX9 2087 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 SAA2-SAA4A0A096LPE2 208 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 ARG1P05089 322 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 WNT2P09544 360 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 SAA2P0DJI9 122 aaPredicted RBP10.24□□□□□ -0.77
CIITA-212ENST00000618207 MYOD1P15172 320 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 CCL3L1P16619 93 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 TRAT1Q6PIZ9 186 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 TCF23Q7RTU1 214 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 SLC35B3Q9H1N7 401 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 KPTNQ9Y664 436 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 ABCA1O95477 2261 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 COL12A1Q99715 3063 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 KBTBD11-OT1A0A1B0GTJ5 212 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 SMCO3A2RU48 225 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 YPEL1O60688 119 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 PLAUP00749 431 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 P0C879 139 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 RD3LP0DJH9 198 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 GATA4P43694 442 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 NHLH1Q02575 133 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 PRB3Q04118 309 aaPredicted RBP10.24□□□□□ -0.77
CIITA-212ENST00000618207 TFF3Q07654 80 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 OR4A16Q8NH70 328 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 C2CD4CQ8TF44 421 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 YPEL2Q96QA6 119 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 DYNLRB1Q9NP97 96 aa10.24□□□□□ -0.77
CIITA-212ENST00000618207 WNK2Q9Y3S1 2297 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 RAB29O14966 203 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 TLE4Q04727 773 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 OR10P1Q8NGE3 313 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 WDR61Q9GZS3 305 aaKnown RBP10.23□□□□□ -0.77
CIITA-212ENST00000618207 ELOVL5Q9NYP7 299 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 C7orf77A4D0Y5 90 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 LYNX1G3V0Z9 82 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 IFNA10P01566 189 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 LYNX1P0DP58 116 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 TNFRSF1AP19438 455 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 RAB2AP61019 212 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 ZNF726P1Q15940 193 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 LRRC75BQ2VPJ9 315 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 DHRS7BQ6IAN0 325 aaPredicted RBP10.23□□□□□ -0.77
CIITA-212ENST00000618207 TMEM14EPQ6UXP3 125 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 CYB561D1Q8N8Q1 229 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
CIITA-212ENST00000618207 C2orf88Q9BSF0 95 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 TOLLIPQ9H0E2 274 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 GFOD1Q9NXC2 390 aa10.23□□□□□ -0.77
CIITA-212ENST00000618207 HIVEP3Q5T1R4 2406 aa10.22□□□□□ -0.77
CIITA-212ENST00000618207 F2RL2O00254 374 aa10.22□□□□□ -0.77
CIITA-212ENST00000618207 FGF7P21781 194 aa10.22□□□□□ -0.77
CIITA-212ENST00000618207 REG1BP48304 166 aa10.22□□□□□ -0.77
CIITA-212ENST00000618207 MRPS11P82912 194 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms