RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 FAM215AQ9Y5M1 114 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 C20orf202A1L168 122 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 SYNGR2O43760 224 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 GABRB1P18505 474 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 HMGA2P52926 109 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 NABP1Q96AH0 204 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
POLR2A-209ENST00000617998 KBTBD11O94819 623 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 AMTP48728 403 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 SELENOTP62341 195 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 DGCR2P98153 550 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 SGMS2Q8NHU3 365 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
POLR2A-209ENST00000617998 TCRBV5S2A0A599 114 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 MPDU1O75352 247 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 TNFSF13O75888 250 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 TMEM167BQ9NRX6 74 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 U3KQ87 197 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 IGKV1D-42A0A075B6H8 117 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 IGHV3OR16-8A0A075B7F1 116 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 FXYD1O00168 92 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 SOD3P08294 240 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 UBE2E1P51965 193 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 Q6ZN92 141 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 TMEM123Q8N131 208 aa9.13□□□□□ -0.95
POLR2A-209ENST00000617998 I3L521 148 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 SNRNP200O75643 2136 aaKnown RBP9.12□□□□□ -0.95
POLR2A-209ENST00000617998 TCRBP04435 133 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 RPL39P5Q59GN2 51 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 GPX7Q96SL4 187 aaPredicted RBP9.12□□□□□ -0.95
POLR2A-209ENST00000617998 PHLDA3Q9Y5J5 127 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 OR4C45A6NMZ5 311 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 C9JCJ5 164 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 F8W036 122 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 RCC1P18754 421 aaPredicted RBP9.12□□□□□ -0.95
POLR2A-209ENST00000617998 MAS1LP35410 378 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 FAAP20Q6NZ36 180 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 FOXG1P55316 489 aaPredicted RBP9.12□□□□□ -0.95
POLR2A-209ENST00000617998 SEC22CQ9BRL7 303 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 ZGRF1Q86YA3 2104 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 CA2P00918 260 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 SCTP09683 121 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 UBA52P62987 128 aaKnown RBP9.12□□□□□ -0.95
POLR2A-209ENST00000617998 FAM169BQ8N8A8 192 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 HDHD3Q9BSH5 251 aaPredicted RBP9.12□□□□□ -0.95
POLR2A-209ENST00000617998 CGB7P0DN87 165 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 PAXXQ9BUH6 204 aa9.12□□□□□ -0.95
POLR2A-209ENST00000617998 LCTP09848 1927 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 PAX8Q06710 450 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 PSG5Q15238 335 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF430Q9H8G1 570 aaPredicted RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 CACNA1AO00555 2505 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 EGR4Q05215 589 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 CADP27708 2225 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 NUP214P35658 2090 aaPredicted RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 NDUFS7O75251 213 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 LY6G6DO95868 133 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 SULT1A2P50226 295 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 SPCS3P61009 180 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF90Q03938 601 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 FAM74A4Q5TZK3 123 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 NEU1Q99519 415 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 RSG1Q9BU20 258 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 C11orf54Q9H0W9 315 aaPredicted RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 CD1BP29016 333 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 FAM53AQ6NSI3 398 aaPredicted RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 TMEM18Q96B42 140 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 WNT10AQ9GZT5 417 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 SEPSECSQ9HD40 501 aaKnown RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 ISLRO14498 428 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 IL7P13232 177 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 FUT5Q11128 374 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 KHDC3LQ587J8 217 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.11□□□□□ -0.95
POLR2A-209ENST00000617998 ROS1P08922 2347 aa9.11□□□□□ -0.95
POLR2A-209ENST00000617998 TMSB15BA0A087X1C1 80 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 IGHV1-8P0DP01 117 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 RPS19P39019 145 aaKnown RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PARP12Q9H0J9 701 aaKnown RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PPIL3Q9H2H8 161 aaKnown RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PKDREJQ9NTG1 2253 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PRTN3P24158 256 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 ZNF485Q8NCK3 441 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 RPUSD4Q96CM3 377 aaKnown RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 TMEM101Q96IK0 257 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 RPS10P5Q9NQ39 176 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 PLXNA3P51805 1871 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 SIX6O95475 246 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 IL6RP08887 468 aaPredicted RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 OR4E1P0C645 316 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 CDC34P49427 236 aaPredicted RBP9.1□□□□□ -0.95
POLR2A-209ENST00000617998 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 GVQW1Q8N7I0 195 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 KCNK15Q9H427 330 aa9.1□□□□□ -0.95
POLR2A-209ENST00000617998 KLHDC2Q9Y2U9 406 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms