RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LY6HO94772 140 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 CT45A6P0DMU7 189 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 CT45A5P0DMU8 189 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 CT45A7P0DMV0 189 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 ADCYAP1P18509 176 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 FBXO7Q9Y3I1 522 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 DCHS2Q6V1P9 2916 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 A0A1B0GV50 99 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 UMAD1C9J7I0 102 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 DLX6P56179 175 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 RELBQ01201 579 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 AARDQ4LEZ3 155 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 AVPI1Q5T686 147 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 CIB3Q96Q77 187 aaPredicted RBP14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 RSG1Q9BU20 258 aa14.19□□□□□ -0.14
PCDHGC3-205ENST00000617641 TMEM8BA6NDV4 472 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 IGHV2-70P01814 119 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 DEFA5Q01523 94 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 TMEM155Q4W5P6 130 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 C4orf17Q53FE4 359 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 ATRAIDQ6UW56 229 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 SCGB1C1Q8TD33 95 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 RHOVQ96L33 236 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 CBLN4Q9NTU7 201 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 UQCC1Q9NVA1 299 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 RNASEK-C17orf49H0YIS7 233 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 SOD3P08294 240 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 ZNF833PQ6ZTB9 187 aa14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 ITLN2Q8WWU7 325 aaPredicted RBP14.18□□□□□ -0.14
PCDHGC3-205ENST00000617641 UBE2L5PA0A1B0GUS4 154 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 PMS2P5A8MQ11 134 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 PPIHO43447 177 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 SNCAP37840 140 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 LRRC75BQ2VPJ9 315 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 AKR1C8PQ5T2L2 129 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 OR4A47Q6IF82 309 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 MRPL20Q9BYC9 149 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 SLC35D1Q9NTN3 355 aa14.17□□□□□ -0.14
PCDHGC3-205ENST00000617641 C9JQL5 133 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 IGKV1-16P04430 117 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 SPCS3P61009 180 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 C11orf71Q6IPW1 123 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 RAB1BQ9H0U4 201 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 TET2Q6N021 2002 aaPredicted RBP14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 CD5P06127 495 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 ZNF841Q6ZN19 808 aa14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 SPTBN1Q01082 2364 aaKnown RBP14.16□□□□□ -0.14
PCDHGC3-205ENST00000617641 A0A1W2PPR1 153 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 F8W036 122 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 GPR37O15354 613 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 REG1BP48304 166 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 OR13D1Q8NGV5 346 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 OR10X1Q8NGY0 326 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 RAB39BQ96DA2 213 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 WDR61Q9GZS3 305 aaKnown RBP14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 RALYQ9UKM9 306 aaKnown RBP14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 C15orf62A8K5M9 175 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 J3QR06 171 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 DVL1P1P54792 670 aaPredicted RBP14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 BTN1A1Q13410 526 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 RTL8BQ17RB0 113 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 C11orf42Q8N5U0 333 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 OR10P1Q8NGE3 313 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 OR52E5Q8NH55 327 aa14.15□□□□□ -0.14
PCDHGC3-205ENST00000617641 TRBV23-1A0A0A0MS06 115 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 C15orf61A6NNL5 157 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 HRASP01112 189 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 IGHV1-8P0DP01 117 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 DIAPH2-AS1Q14236 149 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 HNF4GQ14541 408 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 GUCA2BQ16661 112 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 COMMD1Q8N668 190 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 SCRT1Q9BWW7 348 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 TCF19Q9Y242 345 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 PCP4L1A6NKN8 68 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 FSTL3O95633 263 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 ARG1P05089 322 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 VDAC2P45880 294 aaPredicted RBP14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 CCL20P78556 96 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 GUK1Q16774 197 aa14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 TAF15Q92804 592 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 PARD6GQ9BYG4 376 aaPredicted RBP14.14□□□□□ -0.15
PCDHGC3-205ENST00000617641 SRRM4A7MD48 611 aaKnown RBP14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 H2AFB1P0C5Y9 115 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 SFTA3P0C7M3 94 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 MYOD1P15172 320 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 DLX1P56177 255 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 POU2AF1Q16633 256 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 PDLIM3Q53GG5 364 aaPredicted RBP14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 C10orf91Q5T1B1 145 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 SPSB3Q6PJ21 355 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 ZNF429Q86V71 674 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 LINC00311Q8N616 119 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 ZNF596Q8TC21 504 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 PINX1Q96BK5 328 aaKnown RBP14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 TMEM147Q9BVK8 224 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 VSIRQ9H7M9 311 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 HEYLQ9NQ87 328 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms