RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MIDNQ504T8 468 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 HEPN1Q6WQI6 88 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 SLC25A48Q6ZT89 311 aaKnown RBP6.36□□□□□ -1.39
NEK3-207ENST00000617054 STPG2Q8N412 459 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 OR10X1Q8NGY0 326 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 RITA1Q96K30 269 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 MRPL20Q9BYC9 149 aaKnown RBP6.36□□□□□ -1.39
NEK3-207ENST00000617054 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 GAL3ST2Q9H3Q3 398 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 TAS2R3Q9NYW6 316 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 H7C2Y5 167 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 JTBO76095 146 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 WNT2P09544 360 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 P0C879 139 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 ARF6P62330 175 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 GPR157Q5UAW9 335 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 HAPLN4Q86UW8 402 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 ABHD12Q8N2K0 398 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 LINC00052Q96N35 136 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 HINT2Q9BX68 163 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 SIRT7Q9NRC8 400 aa6.36□□□□□ -1.39
NEK3-207ENST00000617054 A1L4Q6 167 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 MFSD2BA6NFX1 497 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 CEBPZOSA8MTT3 80 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 HPRT1P00492 218 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 PPOXP50336 477 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 TMEM182Q6ZP80 229 aaPredicted RBP6.35□□□□□ -1.39
NEK3-207ENST00000617054 ZNF525Q8N782 197 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 DDB2Q92466 427 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.35□□□□□ -1.39
NEK3-207ENST00000617054 TMEM140Q9NV12 185 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 ONECUT1Q9UBC0 465 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 KAAG1Q9UBP8 84 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 PRELID3BQ9Y3B1 194 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 PPIAL4CA0A0B4J2A2 164 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 C22orf46C9J442 243 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 TOR1AO14656 332 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 TAAR5O14804 337 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 PPIAL4GP0DN37 164 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 IGHV1-8P0DP01 117 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 RAB7AP51149 207 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 RPL23AP62750 156 aaKnown RBP6.35□□□□□ -1.39
NEK3-207ENST00000617054 MEF2CQ06413 473 aaPredicted RBP6.35□□□□□ -1.39
NEK3-207ENST00000617054 RNF141Q8WVD5 230 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 PHYHIPLQ96FC7 376 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 NARS2Q96I59 477 aaKnown RBP6.35□□□□□ -1.39
NEK3-207ENST00000617054 RSG1Q9BU20 258 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 ZFP57Q9NU63 452 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 AUP1Q9Y679 476 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 J3QR06 171 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 ATP6V0CP27449 155 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 DLX6P56179 175 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 TMEM155Q4W5P6 130 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 PXDC1Q5TGL8 231 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 WDR25Q64LD2 544 aaPredicted RBP6.35□□□□□ -1.39
NEK3-207ENST00000617054 UBAC2Q8NBM4 344 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 OR4A16Q8NH70 328 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 DTD1Q8TEA8 209 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 OR4C12Q96R67 309 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 LINC00574Q9H8X3 128 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 LPAR2Q9HBW0 351 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 FBXO7Q9Y3I1 522 aa6.35□□□□□ -1.39
NEK3-207ENST00000617054 A6NNC1 897 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 PRH1P02810 166 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 TMEM177Q53S58 311 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 OR4A47Q6IF82 309 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 PNKDQ8N490 385 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 SLC25A31Q9H0C2 315 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 NCOR1P1Q9H4R4 102 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 HSPB7Q9UBY9 170 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 FAM96BQ9Y3D0 163 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 NAV3Q8IVL0 2385 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 ENSAO43768 121 aaKnown RBP6.34□□□□□ -1.39
NEK3-207ENST00000617054 SLC25A6P12236 298 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 NQO2P16083 231 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 CD24P25063 80 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 KLRD1Q13241 179 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 MSMO1Q15800 293 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 SLC25A24Q6NUK1 477 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 Q6ZRG5 221 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 STX12Q86Y82 276 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 ZNF843Q8N446 348 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 OR13D1Q8NGV5 346 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 RAB40CQ96S21 281 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 MS4A7Q9GZW8 240 aaPredicted RBP6.34□□□□□ -1.39
NEK3-207ENST00000617054 SLC35D1Q9NTN3 355 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 LPAR3Q9UBY5 353 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 WSB1Q9Y6I7 421 aa6.34□□□□□ -1.39
NEK3-207ENST00000617054 BORCS7-ASMTA0A0B4J1R7 106 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 NDUFA2O43678 99 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 APELAP0DMC3 54 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 ZFP36P26651 326 aaKnown RBP6.33□□□□□ -1.4
NEK3-207ENST00000617054 SULT1A1P50225 295 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 GNB2P62879 340 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 OR2G3Q8NGZ4 309 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 CD300LFQ8TDQ1 290 aa6.33□□□□□ -1.4
NEK3-207ENST00000617054 NUP50Q9UKX7 468 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms