RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 WDR54Q9H977 334 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 CLCF1Q9UBD9 225 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 NOTCH3Q9UM47 2321 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 ATG2AQ2TAZ0 1938 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 IGKV1-6A0A0C4DH72 117 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 DIRC3C9JPN6 131 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 M0QZK8 103 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 GGCTO75223 188 aaKnown RBP12.13□□□□□ -0.47
EPHB4-210ENST00000616502 MAS1LP35410 378 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 ZFP36L1Q07352 338 aaKnown RBP12.13□□□□□ -0.47
EPHB4-210ENST00000616502 TGIF2LYQ8IUE0 185 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 DEFB108BQ8NET1 73 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 OR5A2Q8NGI9 324 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 SEMA5BQ9P283 1151 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 S1PR2O95136 353 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 NTF4P34130 210 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 AESQ08117 197 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 NOTCH2Q04721 2471 aa12.13□□□□□ -0.47
EPHB4-210ENST00000616502 TRGV5A0A0B4J1U4 118 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 B4E171 279 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 IRF2P14316 349 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 TSPAN7P41732 249 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 RPP30P78346 268 aaKnown RBP12.12□□□□□ -0.47
EPHB4-210ENST00000616502 FOXC1Q12948 553 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 VAMP3Q15836 100 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 PRR27Q6MZM9 219 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 FAM173AQ9BQD7 235 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
EPHB4-210ENST00000616502 MKRN2OSH3BPM6 223 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 RANP62826 216 aaKnown RBP12.12□□□□□ -0.47
EPHB4-210ENST00000616502 CHRNA10Q9GZZ6 450 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 POLDIP2Q9Y2S7 368 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 DMXL2Q8TDJ6 3036 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 IGKV1-5P01602 117 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 FTH1P19P0C7X4 201 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 MIC13Q5XKP0 118 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 ZCCHC14Q8WYQ9 949 aaKnown RBP12.12□□□□□ -0.47
EPHB4-210ENST00000616502 RNF115Q9Y4L5 304 aa12.12□□□□□ -0.47
EPHB4-210ENST00000616502 CBY3A6NI87 242 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 RAMP3O60896 148 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 SERF1AO75920 110 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 OR2H2O95918 312 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 IGKV1D-33P01593 117 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 IGKV1-33P01594 117 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 TFF1P04155 84 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 ADMP35318 185 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 GPR12P47775 334 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 TIGITQ495A1 244 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 CRIP3Q6Q6R5 217 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 OR8I2Q8N0Y5 310 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 GBGT1Q8N5D6 347 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 FADS6Q8N9I5 356 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 WISP2O76076 250 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 CD59P13987 128 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 CD82P27701 267 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 HINT1P49773 126 aaPredicted RBP12.11□□□□□ -0.47
EPHB4-210ENST00000616502 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 FDCSPQ8NFU4 85 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 NANOS1Q8WY41 292 aaKnown RBP12.11□□□□□ -0.47
EPHB4-210ENST00000616502 SFRP2Q96HF1 295 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 NTN3O00634 580 aaPredicted RBP12.11□□□□□ -0.47
EPHB4-210ENST00000616502 CDX4O14627 284 aaPredicted RBP12.11□□□□□ -0.47
EPHB4-210ENST00000616502 NPSP0C0P6 89 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 CD1BP29016 333 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 OR4P4Q8NGL7 312 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 WDYHV1Q96HA8 205 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 YPEL4Q96NS1 127 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 ZNF331Q9NQX6 463 aaPredicted RBP12.11□□□□□ -0.47
EPHB4-210ENST00000616502 SLC35D1Q9NTN3 355 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 PPIAL4AQ9Y536 164 aa12.11□□□□□ -0.47
EPHB4-210ENST00000616502 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
EPHB4-210ENST00000616502 ODAMA1E959 279 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 M0R1X1 148 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 PDE6DO43924 150 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 ARL14EPLP0DKL9 152 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 COX5BP10606 129 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 FXYD3Q14802 87 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 WNT10AQ9GZT5 417 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 HSBP1O75506 76 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 LINC00205P59089 165 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 POLR3KQ9Y2Y1 108 aaPredicted RBP12.1□□□□□ -0.47
EPHB4-210ENST00000616502 NUP210LQ5VU65 1888 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
EPHB4-210ENST00000616502 ARR3P36575 388 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 ZNF826PQ6ZT77 177 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
EPHB4-210ENST00000616502 LSM10Q969L4 123 aaKnown RBP12.1□□□□□ -0.47
EPHB4-210ENST00000616502 OPN3Q9H1Y3 402 aaPredicted RBP12.1□□□□□ -0.47
EPHB4-210ENST00000616502 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
EPHB4-210ENST00000616502 SPINT2O43291 252 aa12.09□□□□□ -0.47
EPHB4-210ENST00000616502 IGHEP01854 428 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms