RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ZNRF1Q8ND25 227 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 EREGO14944 169 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 SPRY3O43610 288 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 FOLR2P14207 255 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 CEACAM8P31997 349 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 GUSBP1Q15486 140 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 MSMPQ1L6U9 139 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 H2BFWTQ7Z2G1 175 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 LEAP2Q969E1 77 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 GNG12Q9UBI6 72 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 DSCAMO60469 2012 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 SNRPCP09234 159 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 CD82P27701 267 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 PRDX2P32119 198 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 MC5RP33032 325 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 CATR1Q13166 79 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 LRRC75BQ2VPJ9 315 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 ZNF506Q5JVG8 444 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 VKORC1L1Q8N0U8 176 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 BEND2Q8NDZ0 799 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 WDR61Q9GZS3 305 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 EGLN1Q9GZT9 426 aa11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 ZNF71Q9NQZ8 489 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-231ENST00000616390 PKDREJQ9NTG1 2253 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 A0A1B0GW64 132 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 DNLZQ5SXM8 178 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 RNF2Q99496 336 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 LRRC30A6NM36 301 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 MSMO1Q15800 293 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 TVP23CQ96ET8 276 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 SLC25A22Q9H936 323 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 SLC39A9Q9NUM3 307 aa11.58□□□□□ -0.56
CACNA1C-231ENST00000616390 POLEQ07864 2286 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 PIGBOS1A0A0B4J2F0 54 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 FCGR3BO75015 233 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 HSPB1P04792 205 aaKnown RBP11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 SEM1Q6ZVN7 128 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 MOGAT3Q86VF5 341 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 ZADH2Q8N4Q0 377 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 NDUFAF3Q9BU61 184 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 ARFGEF3Q5TH69 2177 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 MAP1LC3B2A6NCE7 125 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 AGAP20933 346 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 SCGB2A2Q13296 93 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 NCR3LG1Q68D85 454 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 LHX4Q969G2 390 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 MAP1LC3BQ9GZQ8 125 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 TUBA4BQ9H853 241 aa11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 ZNF430Q9H8G1 570 aaPredicted RBP11.57□□□□□ -0.56
CACNA1C-231ENST00000616390 PTPRBP23467 1997 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 TGIF2-C20orf24A0A0A6YYL0 155 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 SPINT2O43291 252 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 IFNA17P01571 189 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 CXCL1P09341 107 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 BMP5P22003 454 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 TFF3Q07654 80 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 KHDC3LQ587J8 217 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 DEFB108BQ8NET1 73 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 OR2V2Q96R30 315 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 SMDT1Q9H4I9 107 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 ZNF318Q5VUA4 2279 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 OR8U8P0C7N1 319 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 BCL2P10415 239 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 KITLGP21583 273 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 FGF7P21781 194 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 GPR12P47775 334 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 RPL39P5Q59GN2 51 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 UTF1Q5T230 341 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 Q8WTZ3 238 aa11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 TET2Q6N021 2002 aaPredicted RBP11.56□□□□□ -0.56
CACNA1C-231ENST00000616390 IGKV1D-17A0A075B6S4 117 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 K7EM74 188 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 TCF21O43680 179 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 IGHV2-5P01817 119 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 ERVFRD-1P60508 538 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 ACSM6Q6P461 480 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 RPP25LQ8N5L8 163 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 GATAD1Q8WUU5 269 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 MUCL1Q96DR8 90 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 CYB5BO43169 146 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 ZNF737O75373 536 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 NBEAP1P0C6P0 100 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 TMEM41BQ5BJD5 291 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 OR10P1Q8NGE3 313 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 QTRT1Q9BXR0 403 aaKnown RBP11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 PRO1933Q9H354 126 aa11.55□□□□□ -0.56
CACNA1C-231ENST00000616390 NAGKQ9UJ70 344 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms