RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	RHOB	P62745	196 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	CENPW	Q5EE01	88 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	ABHD12	Q8N2K0	398 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	KCNS1	Q96KK3	526 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	DLL3	Q9NYJ7	618 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGHV1OR21-1	A0A087WYE8	117 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	IGKV1-6	A0A0C4DH72	117 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	ODF3L1	Q8IXM7	274 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	GSX1	Q9H4S2	264 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	CLEC5A	Q9NY25	188 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	ANKRD39	Q53RE8	183 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	C20orf204	Q6ZNR8	217 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	RPS19BP1	Q86WX3	136 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	FGFBP3	Q8TAT2	258 aa		13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	LSM10	Q969L4	123 aa	Known RBP	13.22	□□□□□ -0.29
SYNRG-223	ENST00000616179	CDIPT	O14735	213 aa		13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	LINC00205	P59089	165 aa		13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	RPL15	P61313	204 aa	Known RBP	13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	GNG3	P63215	75 aa		13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	IBA57	Q5T440	356 aa	Known RBP	13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	RIPPLY2	Q5TAB7	128 aa		13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	OR8B3	Q8NGG8	313 aa		13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	GTF2H5	Q6ZYL4	71 aa		13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	DAZAP1	Q96EP5	407 aa	Known RBP	13.21	□□□□□ -0.29
SYNRG-223	ENST00000616179	CGA	P01215	116 aa		13.21	□□□□□ -0.3
SYNRG-223	ENST00000616179	TYMS	P04818	313 aa		13.21	□□□□□ -0.3
SYNRG-223	ENST00000616179	NPPC	P23582	126 aa		13.21	□□□□□ -0.3
SYNRG-223	ENST00000616179	GPR12	P47775	334 aa		13.21	□□□□□ -0.3
SYNRG-223	ENST00000616179	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.21	□□□□□ -0.3
SYNRG-223	ENST00000616179	TMEM251	Q8N6I4	163 aa		13.21	□□□□□ -0.3
SYNRG-223	ENST00000616179	UBE2G1	P62253	170 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	RBX1	P62877	108 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZC2HC1A	Q96GY0	325 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZPBP	Q9BS86	351 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	CST9L	Q9H4G1	147 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	hCG_38984	A0A1B0GV85	526 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	LRRC30	A6NM36	301 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	RRH	O14718	337 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	CEP250	Q9BV73	2442 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	ROS1	P08922	2347 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	OR2T8	A6NH00	312 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	RHBDL1	O75783	438 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	PLGLB1	Q02325	96 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	WDR74	Q6RFH5	385 aa	Predicted RBP	13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	WFDC8	Q8IUA0	241 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	RCHY1	Q96PM5	261 aa		13.2	□□□□□ -0.3
SYNRG-223	ENST00000616179	SYNGR3	O43761	229 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	CA7	P43166	264 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	AES	Q08117	197 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	RAB30	Q15771	203 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	KCNMB1	Q16558	191 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	TMEM240	Q5SV17	173 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	SLC25A34	Q6PIV7	304 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	HSPB7	Q9UBY9	170 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	TIMM9	Q9Y5J7	89 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	OR4C46	A6NHA9	309 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	FKBP2	P26885	142 aa	Known RBP	13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	CDKN1B	P46527	198 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	OCIAD2	Q56VL3	154 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	OR10D3	Q8NH80	312 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	CLEC7A	Q9BXN2	247 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	ABI3	Q9P2A4	366 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	KIAA1549L	Q6ZVL6	1849 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	CHEK1	O14757	476 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	CA2	P00918	260 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	C1orf185	Q5T7R7	199 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	SRXN1	Q9BYN0	137 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZNF391	Q9UJN7	358 aa		13.19	□□□□□ -0.3
SYNRG-223	ENST00000616179	C17orf98	A8MV24	154 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	MT-ND6	P03923	174 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	DSCR4	P56555	118 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	SLC23A3	Q6PIS1	610 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	MMP17	Q9ULZ9	603 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179		A0A1W2PS18	150 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZNF891	A8MT65	544 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	PPIAL4D	F5H284	164 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	ETV2	O00321	342 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	COMP	P49747	757 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	RPL8	P62917	257 aa	Known RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	HYAL1	Q12794	435 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	WDR54	Q9H977	334 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZNF355P	Q9NSJ1	428 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	USP34	Q70CQ2	3546 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	CTSS	P25774	331 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	GCHFR	P30047	84 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	PRRX1	P54821	245 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	C19orf35	Q6ZS72	473 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	IGKV1-39	P01597	117 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	HLA-DQA1	P01909	254 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	IGKV1D-39	P04432	117 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	ZNF83	P51522	516 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	TMEM191A	Q9H0A3	160 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	SH2D2A	Q9NP31	389 aa		13.18	□□□□□ -0.3
SYNRG-223	ENST00000616179	GNG7	O60262	68 aa		13.17	□□□□□ -0.3
SYNRG-223	ENST00000616179	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.17	□□□□□ -0.3

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