RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 GDF15Q99988 308 aa5.91□□□□□ -1.46
CLCN3-211ENST00000613795 SHANK3Q9BYB0 1731 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 C17orf51A8MQB3 221 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 DEFB108AA8MXU0 73 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 PPIAL4DF5H284 164 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 LGALS3P17931 250 aaKnown RBP5.9□□□□□ -1.46
CLCN3-211ENST00000613795 ATP5IP56385 69 aaPredicted RBP5.9□□□□□ -1.46
CLCN3-211ENST00000613795 RTP5Q14D33 572 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 TMEM177Q53S58 311 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 CBLN3Q6UW01 205 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 PRNTQ86SH4 94 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 ZNF418Q8TF45 676 aaPredicted RBP5.9□□□□□ -1.46
CLCN3-211ENST00000613795 SEMA5BQ9P283 1151 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 A0A1W2PPE3 182 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 SYNGR1O43759 233 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 GAGE2BQ13066 116 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 GAGE2EQ4V326 116 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 MUC15Q8N387 334 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 ST6GALNAC6Q969X2 333 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 GAGE2DQ9UEU5 116 aa5.9□□□□□ -1.46
CLCN3-211ENST00000613795 EVPLQ92817 2033 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 CRYBB3P26998 211 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF645Q8N7E2 425 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF441Q8N8Z8 693 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 OR1L8Q8NGR8 309 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 OR13C6PQ8NH95 151 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 HIGD1AQ9Y241 93 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 ATAD5Q96QE3 1844 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 C16orf97H3BN30 126 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 HYPMO75409 117 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 ATP5LO75964 103 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 CLDN14O95500 239 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 KLRB1Q12918 225 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 SAMD5Q5TGI4 173 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 FAM27BQ5VT28 67 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 SFTPA2Q8IWL1 248 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 SFTPA1Q8IWL2 248 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 SHISA5Q8N114 240 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 CHCHD1Q96BP2 118 aaKnown RBP5.9□□□□□ -1.47
CLCN3-211ENST00000613795 ABHD14AQ9BUJ0 271 aa5.9□□□□□ -1.47
CLCN3-211ENST00000613795 DXOO77932 396 aaKnown RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF205O95201 554 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 IGHMP01871 453 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 GAGE13Q4V321 117 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 OR4D5Q8NGN0 318 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 AICDAQ9GZX7 198 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 CST9LQ9H4G1 147 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 GP6Q9HCN6 339 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 IGHV1-45A0A0A0MS14 117 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 TRAV1-1A0A0B4J248 108 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 F2RL2O00254 374 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 CD5LO43866 347 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 C1QCP02747 245 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF735P0CB33 412 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 FGF12P61328 243 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 MIC13Q5XKP0 118 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 UNQ5815/PRO19632Q6UWF5 114 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 SPRED2Q7Z698 418 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 LRTM2Q8N967 370 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 RNF125Q96EQ8 232 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 RTBDNQ9BSG5 229 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 SLC25A2Q9BXI2 301 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 RTN4RQ9BZR6 473 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF646O15015 1829 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 GAGE12BA1L429 117 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 NPIPB13A6NJU9 1138 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 NPIPB4C9JG80 1138 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 PRKNO60260 465 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 MC5RP33032 325 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 FOXL1Q12952 345 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 IZUMO4Q1ZYL8 232 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 PRSS41Q7RTY9 318 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 RFESDQ8TAC1 157 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 SNHG12Q9BXW3 62 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 FAM60AQ9NP50 221 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 NINQ8N4C6 2090 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 IGHV3-43A0A0B4J1X8 118 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 FAM90A27PA6NNH2 459 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 SHISA8B8ZZ34 492 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 H7C2G1 150 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 J3QR06 171 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 KLF4O43474 513 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 IGHV3-43DP0DP04 118 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 CDKN1BP46527 198 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 TMPRSS3P57727 454 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 TBR1Q16650 682 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ALKBH6Q3KRA9 238 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ACSF3Q4G176 576 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 CYTL1Q9NRR1 136 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 A0A0G2JMM0 328 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 A0A1W2PPB8 328 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 KIR3DP1A8MWS1 328 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ATXN7O15265 892 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 IL9P15248 144 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 FGFRL1Q8N441 504 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 ZNF501Q96CX3 271 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-211ENST00000613795 Q96M66 194 aa5.89□□□□□ -1.47
CLCN3-211ENST00000613795 RPP25Q9BUL9 199 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms