RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 MSMO1Q15800 293 aa18.42■□□□□ 0.54
POLR2J3-220ENST00000613744 ZNF611Q8N823 705 aa18.42■□□□□ 0.54
POLR2J3-220ENST00000613744 SARAFQ96BY9 339 aa18.42■□□□□ 0.54
POLR2J3-220ENST00000613744 GPHA2Q96T91 129 aa18.42■□□□□ 0.54
POLR2J3-220ENST00000613744 SLC25A22Q9H936 323 aa18.42■□□□□ 0.54
POLR2J3-220ENST00000613744 PAM16Q9Y3D7 125 aa18.42■□□□□ 0.54
POLR2J3-220ENST00000613744 KMT2BQ9UMN6 2715 aaPredicted RBP18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 TNFSF12O43508 249 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 PDCD1Q15116 288 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 LEMD1Q68G75 181 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 TXNDC17Q9BRA2 123 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 TMEM147Q9BVK8 224 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 ULBP2Q9BZM5 246 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 ZGRF1Q86YA3 2104 aa18.41■□□□□ 0.54
POLR2J3-220ENST00000613744 RELNP78509 3460 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 IGKV1-6A0A0C4DH72 117 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 K7EP13 123 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 FGF12P61328 243 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 Q0VG73 95 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 C11orf94C9JXX5 98 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 PAGE4O60829 102 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 CDKN1BP46527 198 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 RNF2Q99496 336 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 HSPB9Q9BQS6 159 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 SH3BGRL2Q9UJC5 107 aa18.4■□□□□ 0.54
POLR2J3-220ENST00000613744 BATFQ16520 125 aa18.39■□□□□ 0.53
POLR2J3-220ENST00000613744 OR10V1Q8NGI7 309 aa18.39■□□□□ 0.53
POLR2J3-220ENST00000613744 KCNIP2Q9NS61 270 aa18.39■□□□□ 0.53
POLR2J3-220ENST00000613744 TP53TG3Q9ULZ0 132 aa18.39■□□□□ 0.53
POLR2J3-220ENST00000613744 KIAA1549Q9HCM3 1950 aa18.39■□□□□ 0.53
POLR2J3-220ENST00000613744 NPIPB11E5RHQ5 1161 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 TDRG1Q3Y452 100 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 SPANXN5Q5MJ07 72 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 ABHD3Q8WU67 409 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 CIB3Q96Q77 187 aaPredicted RBP18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 PRDM14Q9GZV8 571 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 UQCR10Q9UDW1 63 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 A0A1B0GUS0 222 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 MDFIC2A0A1B0GVS7 189 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 NKX6-3A6NJ46 265 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 DNPH1O43598 174 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 IGKV1-39P01597 117 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 IGKV1D-39P04432 117 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 CRISP2P16562 243 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 NPPCP23582 126 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 COMPP49747 757 aaPredicted RBP18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 CALHM1Q8IU99 346 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 SGMS2Q8NHU3 365 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 SFRP2Q96HF1 295 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 PRRG4Q9BZD6 226 aa18.38■□□□□ 0.53
POLR2J3-220ENST00000613744 DEGS1O15121 323 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 IGKV1-5P01602 117 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 CTRLP40313 264 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 LINC00310P59036 64 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 LINC00596Q86U02 117 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 OR2D3Q8NGH3 330 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 OR51H1Q8NH63 302 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 VN1R17PQ8TDU5 208 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 PIGCQ92535 297 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 TRIB1Q96RU8 372 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 PATZ1Q9HBE1 687 aaKnown RBP18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 FFAR4Q5NUL3 377 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 SPSB4Q96A44 273 aa18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 LIN7CQ9NUP9 197 aaKnown RBP18.37■□□□□ 0.53
POLR2J3-220ENST00000613744 TRBV9A0A0B4J1U6 114 aa18.36■□□□□ 0.53
POLR2J3-220ENST00000613744 RPRMLQ8N4K4 120 aa18.36■□□□□ 0.53
POLR2J3-220ENST00000613744 GATAD1Q8WUU5 269 aa18.36■□□□□ 0.53
POLR2J3-220ENST00000613744 CFAP46Q8IYW2 2715 aa18.36■□□□□ 0.53
POLR2J3-220ENST00000613744 RP1L1Q8IWN7 2480 aaPredicted RBP18.36■□□□□ 0.53
POLR2J3-220ENST00000613744 SERF1AO75920 110 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 TOMM40O96008 361 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 MRPL49Q13405 166 aaKnown RBP18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 C1orf174Q8IYL3 243 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 FAM57AQ8TBR7 257 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 ZNF586Q9NXT0 402 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 NBASA2RRP1 2371 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 C17orf112F2Z3M2 114 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 CDKN1AP38936 164 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 GNB1P62873 340 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 IGFBP7Q16270 282 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 RIPPLY2Q5TAB7 128 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 RAB1CQ92928 201 aa18.35■□□□□ 0.53
POLR2J3-220ENST00000613744 BCL3P20749 454 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 KITLGP21583 273 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 TFPI2P48307 235 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 PTTG1IPP53801 180 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 VWC2Q2TAL6 325 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 ZNF709Q8N972 641 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 ZNF716A6NP11 495 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 SUMO1P63165 101 aaKnown RBP18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 TLE1Q04724 770 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 IZUMO4Q1ZYL8 232 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 DOLPP1Q86YN1 238 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 SF3B5Q9BWJ5 86 aaKnown RBP18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 SAMD10Q9BYL1 202 aa18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 GSX1Q9H4S2 264 aaPredicted RBP18.34■□□□□ 0.53
POLR2J3-220ENST00000613744 SAA2-SAA4A0A096LPE2 208 aa18.33■□□□□ 0.52
POLR2J3-220ENST00000613744 NDUFB8O95169 186 aa18.33■□□□□ 0.52
POLR2J3-220ENST00000613744 ZNF843Q8N446 348 aa18.33■□□□□ 0.52
POLR2J3-220ENST00000613744 ZIC4Q8N9L1 334 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms