RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 SSX2Q16385 188 aa16.32■□□□□ 0.2
CPNE9-205ENST00000613455 TMEM177Q53S58 311 aa16.32■□□□□ 0.2
CPNE9-205ENST00000613455 SSX9Q7RTT3 188 aa16.32■□□□□ 0.2
CPNE9-205ENST00000613455 NOXA1Q86UR1 476 aa16.32■□□□□ 0.2
CPNE9-205ENST00000613455 CFHR4Q92496 578 aa16.32■□□□□ 0.2
CPNE9-205ENST00000613455 IGHV3OR16-10A0A075B7F0 116 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 OOSP1A8MZH6 123 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 J3QLI3 93 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 MPC2O95563 127 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 IGHV4-38-2P0DP08 117 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 RAB32Q13637 225 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 HABP2Q14520 560 aaPredicted RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 SMCO1Q147U7 214 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 POU2AF1Q16633 256 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 RUSC1-AS1Q66K80 236 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 THOC7Q6I9Y2 204 aaKnown RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 H2BFWTQ7Z2G1 175 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 OSR1Q8TAX0 266 aaPredicted RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 FLYWCH2Q96CP2 140 aaKnown RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 RHOVQ96L33 236 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 MBPP02686 304 aaPredicted RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 PSMB6P28072 239 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 EIF2B2P49770 351 aaKnown RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 ERVK-16P61578 105 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 KLF17Q5JT82 389 aaPredicted RBP16.31■□□□□ 0.2
CPNE9-205ENST00000613455 DMBX1Q8NFW5 382 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 OR4C13Q8NGP0 309 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 HARBI1Q96MB7 349 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 TMEM140Q9NV12 185 aa16.31■□□□□ 0.2
CPNE9-205ENST00000613455 NOTCH2Q04721 2471 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 MYO9AB2RTY4 2548 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 SHOXO15266 292 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 OR9G9P0C7N8 305 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 GPR157Q5UAW9 335 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 CCDC144NLQ6NUI1 221 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 COA4Q9NYJ1 87 aa16.3■□□□□ 0.2
CPNE9-205ENST00000613455 TEX15Q9BXT5 2789 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 H0YIZ8 118 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 VENTXO95231 258 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 SCGB1D2O95969 90 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 HRASP01112 189 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 FGL1Q08830 312 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 CXorf66Q5JRM2 361 aaPredicted RBP16.29■□□□□ 0.2
CPNE9-205ENST00000613455 CYB5R2Q6BCY4 276 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 BRD3OSQ6XYD6 125 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 MALSU1Q96EH3 234 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 RITA1Q96K30 269 aa16.29■□□□□ 0.2
CPNE9-205ENST00000613455 S100A10P60903 97 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 OR4A47Q6IF82 309 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 C11orf87Q6NUJ2 197 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 OR1S1Q8NH92 325 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 GRPEL2Q8TAA5 225 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 HYLS1Q96M11 299 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 MS4A7Q9GZW8 240 aaPredicted RBP16.28■□□□□ 0.2
CPNE9-205ENST00000613455 TRAV3A0A0B4J244 114 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 FAM90A9PA6NNJ1 464 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 K7EPK0 472 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 SMAD7O15105 426 aaKnown RBP16.28■□□□□ 0.2
CPNE9-205ENST00000613455 NXPH3O95157 252 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 IGLV2-23P01705 113 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 IL6RP08887 468 aaPredicted RBP16.28■□□□□ 0.2
CPNE9-205ENST00000613455 SAA1P0DJI8 122 aaPredicted RBP16.28■□□□□ 0.2
CPNE9-205ENST00000613455 CD1BP29016 333 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 ID3Q02535 119 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 FAM71E2Q8N5Q1 922 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 RNF126Q9BV68 326 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 MBD2Q9UBB5 411 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 RCL1Q9Y2P8 373 aaKnown RBP16.28■□□□□ 0.2
CPNE9-205ENST00000613455 NSG2Q9Y328 171 aa16.28■□□□□ 0.2
CPNE9-205ENST00000613455 CSPG4Q6UVK1 2322 aa16.27■□□□□ 0.2
CPNE9-205ENST00000613455 NKX2-1P43699 371 aaPredicted RBP16.27■□□□□ 0.19
CPNE9-205ENST00000613455 RPS16P62249 146 aaKnown RBP16.27■□□□□ 0.19
CPNE9-205ENST00000613455 FBLN7Q53RD9 439 aa16.27■□□□□ 0.19
CPNE9-205ENST00000613455 FOXRED2Q8IWF2 684 aa16.27■□□□□ 0.19
CPNE9-205ENST00000613455 OR5AC2Q9NZP5 309 aa16.27■□□□□ 0.19
CPNE9-205ENST00000613455 LSM5Q9Y4Y9 91 aaKnown RBP16.27■□□□□ 0.19
CPNE9-205ENST00000613455 POMT1Q9Y6A1 747 aa16.27■□□□□ 0.19
CPNE9-205ENST00000613455 FXYD6-FXYD2A0A087WZ82 144 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 ST8SIA3O43173 380 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 DEDDO75618 318 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 SLC25A4P12235 298 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 OR2B8PP59922 312 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 RELBQ01201 579 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 PUSL1Q8N0Z8 303 aaKnown RBP16.26■□□□□ 0.19
CPNE9-205ENST00000613455 ITGB1BP2Q9UKP3 347 aa16.26■□□□□ 0.19
CPNE9-205ENST00000613455 LYL1P12980 280 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 ARHGDIBP52566 201 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 AARDQ4LEZ3 155 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 PRSS54Q6PEW0 395 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 THAP6Q8TBB0 222 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 AIFM2Q9BRQ8 373 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.25■□□□□ 0.19
CPNE9-205ENST00000613455 BET1LQ9NYM9 111 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 TNCP24821 2201 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 TET2Q6N021 2002 aaPredicted RBP16.25■□□□□ 0.19
CPNE9-205ENST00000613455 IGKV1D-33P01593 117 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 IGKV1-33P01594 117 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 PET100P0DJ07 73 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 CD24P25063 80 aa16.25■□□□□ 0.19
CPNE9-205ENST00000613455 CNTFRP26992 372 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms