RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 DTYMKP23919 212 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 ARL6IP1Q15041 203 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 HAGHQ16775 308 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 ZFAND6Q6FIF0 208 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 FAM223AQ8IWN6 122 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 ACOT12Q8WYK0 555 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 Q9H521 79 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 AKIP1Q9NQ31 210 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 PEMTQ9UBM1 199 aa13.51□□□□□ -0.25
SSBP1-215ENST00000612337 BIRC6Q9NR09 4857 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 LCE6AA0A183 80 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 CREBL2O60519 120 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-215ENST00000612337 SAA1P0DJI8 122 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-215ENST00000612337 MECP2P51608 486 aaKnown RBP13.5□□□□□ -0.25
SSBP1-215ENST00000612337 RHOGP84095 191 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 ZNF645Q8N7E2 425 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 OR2K2Q8NGT1 345 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 SPIN2AQ99865 258 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 SPIN2BQ9BPZ2 258 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 YTHDF1Q9BYJ9 559 aaKnown RBP13.5□□□□□ -0.25
SSBP1-215ENST00000612337 TUBA4BQ9H853 241 aa13.5□□□□□ -0.25
SSBP1-215ENST00000612337 ZNF430Q9H8G1 570 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-215ENST00000612337 ELF5Q9UKW6 265 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-215ENST00000612337 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 IZUMO1RA6ND01 250 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 BMPR1BO00238 502 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 AIREO43918 545 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 ACTL6BO94805 426 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 PRH1P02810 166 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 GALP22466 123 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 ZNF45Q02386 682 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 ATP5G2Q06055 141 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 EXOSC2Q13868 293 aaKnown RBP13.49□□□□□ -0.25
SSBP1-215ENST00000612337 CDK10Q15131 360 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 NR2C2APQ86WQ0 139 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 MMD2Q8IY49 270 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 SPARTQ8N0X7 666 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 TTC9CQ8N5M4 171 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 ATG5Q9H1Y0 275 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 GAR1Q9NY12 217 aaKnown RBP13.49□□□□□ -0.25
SSBP1-215ENST00000612337 OR2W1Q9Y3N9 320 aa13.49□□□□□ -0.25
SSBP1-215ENST00000612337 FCGR3BO75015 233 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 HLA-DQB1P01920 261 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 CTXN2P0C2S0 81 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 CDNFQ49AH0 187 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 C22orf42Q6IC83 251 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 KCTD9Q7L273 389 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 DCUN1D5Q9BTE7 237 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 PRELID3BQ9Y3B1 194 aa13.48□□□□□ -0.25
SSBP1-215ENST00000612337 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.47□□□□□ -0.25
SSBP1-215ENST00000612337 J3QRK9 145 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 TUSC2O75896 110 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 SLC22A5O76082 557 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 IFNA6P05013 189 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 CD36P16671 472 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 HACD4Q5VWC8 232 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 NECAP1Q8NC96 275 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 ST6GALNAC5Q9BVH7 336 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 DCSTAMPQ9H295 470 aa13.47□□□□□ -0.25
SSBP1-215ENST00000612337 MRPS7Q9Y2R9 242 aaKnown RBP13.47□□□□□ -0.25
SSBP1-215ENST00000612337 RBMX2Q9Y388 322 aaKnown RBP13.47□□□□□ -0.25
SSBP1-215ENST00000612337 IGLV2-14P01704 120 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 NFYAP23511 347 aaPredicted RBP13.46□□□□□ -0.25
SSBP1-215ENST00000612337 PSMB9P28065 219 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 RPL30P62888 115 aaKnown RBP13.46□□□□□ -0.25
SSBP1-215ENST00000612337 FAM209BQ5JX69 171 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 C10orf55Q5SWW7 151 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 ADAMTSL5Q6ZMM2 481 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 SLC25A42Q86VD7 318 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 LAX1Q8IWV1 398 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 FCGR1BQ92637 280 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 ZNF257Q9Y2Q1 563 aa13.46□□□□□ -0.25
SSBP1-215ENST00000612337 NOTOA8MTQ0 251 aa13.45□□□□□ -0.26
SSBP1-215ENST00000612337 C15orf32Q32M92 178 aa13.45□□□□□ -0.26
SSBP1-215ENST00000612337 CD300EQ496F6 205 aaPredicted RBP13.45□□□□□ -0.26
SSBP1-215ENST00000612337 OR2B11Q5JQS5 317 aa13.45□□□□□ -0.26
SSBP1-215ENST00000612337 CNIH2Q6PI25 160 aa13.45□□□□□ -0.26
SSBP1-215ENST00000612337 KCTD12Q96CX2 325 aaKnown RBP13.45□□□□□ -0.26
SSBP1-215ENST00000612337 OR51E2Q9H255 320 aa13.45□□□□□ -0.26
SSBP1-215ENST00000612337 IGKV1D-13A0A0B4J2D9 117 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 SMIM30A4D0T7 59 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 TEX22C9J3V5 150 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 OR2J3O76001 311 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 SCGNO76038 276 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 IGKV1-13P0DP09 117 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 FGF9P31371 208 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-215ENST00000612337 CD81P60033 236 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
SSBP1-215ENST00000612337 VKORC1L1Q8N0U8 176 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 OR4S2Q8NH73 311 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 VSTM2AQ8TAG5 236 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 NUDCD2Q8WVJ2 157 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 HSD17B10Q99714 261 aaKnown RBP13.44□□□□□ -0.26
SSBP1-215ENST00000612337 PLEKHA3Q9HB20 300 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 TXNL4BQ9NX01 149 aaKnown RBP13.44□□□□□ -0.26
SSBP1-215ENST00000612337 CEPT1Q9Y6K0 416 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 ALMS1Q8TCU4 4167 aa13.44□□□□□ -0.26
SSBP1-215ENST00000612337 TMEM235A6NFC5 223 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms