RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	COL5A1-AS1	Q5SY13	56 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	SPATA46	Q5T0L3	261 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	TREML4	Q6UXN2	200 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	VN1R17P	Q8TDU5	208 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	GGTLC1	Q9BX51	225 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	HES4	Q9HCC6	221 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	KMT2E	Q8IZD2	1858 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	CDIPT	O14735	213 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	PSPN	O60542	156 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	MMP23A	O75900	390 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	ZNF766	Q5HY98	468 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	OR2M7	Q8NG81	312 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	ZNF586	Q9NXT0	402 aa		11.45	□□□□□ -0.58
UBE2F-223	ENST00000612130	LNP1	A1A4G5	178 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	LINC00473	A8K010	186 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	ZNF891	A8MT65	544 aa	Predicted RBP	11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	FCN1	O00602	326 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	MT-ND6	P03923	174 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	CXCL12	P48061	93 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	THBS3	P49746	956 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	RPL19	P84098	196 aa	Known RBP	11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	TBC1D28	Q2M2D7	210 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	RPEL1	Q2QD12	228 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	MCEMP1	Q8IX19	187 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	RNF2	Q99496	336 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	MGST2	Q99735	147 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	GNB1L	Q9BYB4	327 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	TRGV10	A0A0A0MS01	117 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	PRSS46	E5RG02	174 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130		K7EN84	100 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	MT-CO2	P00403	227 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	GCHFR	P30047	84 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	RPL31	P62899	125 aa	Known RBP	11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	PLGLB1	Q02325	96 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	COX19	Q49B96	90 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	MDP1	Q86V88	176 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	SIGLECL1	Q8N7X8	197 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	OR52E5	Q8NH55	327 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	UHRF2	Q96PU4	802 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	FSCN3	Q9NQT6	498 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	ARL2-SNX15	V9GYD0	113 aa		11.44	□□□□□ -0.58
UBE2F-223	ENST00000612130	MYO15A	Q9UKN7	3530 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	SAA2-SAA4	A0A096LPE2	208 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	SNURFL	B1AK76	121 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	RRH	O14718	337 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	CELA3A	P09093	270 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	OR9G9	P0C7N8	305 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	SELE	P16581	610 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	HNF1A	P20823	631 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	CEBPD	P49716	269 aa	Predicted RBP	11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	PSG7	Q13046	419 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	HLA-DRB5	Q30154	266 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	KRTCAP3	Q53RY4	240 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	WDR73	Q6P4I2	378 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	LRP11	Q86VZ4	500 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	BCL2L2	Q92843	193 aa	Predicted RBP	11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	LRFN3	Q9BTN0	628 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	FBXL7	Q9UJT9	491 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	ZFP30	Q9Y2G7	519 aa		11.43	□□□□□ -0.58
UBE2F-223	ENST00000612130	SLC17A3	O00476	420 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	SMPD2	O60906	423 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	AREG	P15514	252 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	IER3	P46695	156 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	OR10J3	Q5JRS4	329 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	DCAF12	Q5T6F0	453 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	MIC13	Q5XKP0	118 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	SPINK14	Q6IE38	97 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	MMD2	Q8IY49	270 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	PRR7	Q8TB68	274 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	EAF1	Q96JC9	268 aa	Predicted RBP	11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	SFXN3	Q9BWM7	321 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	MS4A5	Q9H3V2	200 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	SLC45A2	Q9UMX9	530 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	ESPL1	Q14674	2120 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	GPX1	P07203	203 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	OR10J4	P0C629	311 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	CTRL	P40313	264 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	VDAC2	P45880	294 aa	Predicted RBP	11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	RHOB	P62745	196 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	OR5I1	Q13606	314 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	C1orf174	Q8IYL3	243 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130		Q8N976	141 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	COQ2	Q96H96	371 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	ZNF576	Q9H609	170 aa		11.42	□□□□□ -0.58
UBE2F-223	ENST00000612130	IQCF6	A8MYZ5	107 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	DIRC3	C9JPN6	131 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130		F2Z2F3	143 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	AES	Q08117	197 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	MRPL49	Q13405	166 aa	Known RBP	11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	SSPN	Q14714	243 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	BATF	Q16520	125 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	PRAMEF5	Q5TYX0	476 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	PRAMEF6	Q5VXH4	476 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	MRGPRD	Q8TDS7	321 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	FAM216A	Q8WUB2	273 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	GNB4	Q9HAV0	340 aa		11.41	□□□□□ -0.58
UBE2F-223	ENST00000612130	LSM4	Q9Y4Z0	139 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms