RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 RRHO14718 337 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 CBLN1P23435 193 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 OR10J1P30954 320 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 TRIP6Q15654 476 aaKnown RBP12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 LINC00696Q6ZRV3 163 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 Q6ZWC4 215 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 ZCCHC14Q8WYQ9 949 aaKnown RBP12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 NINJ1Q92982 152 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 PSG11Q9UQ72 335 aa12.6□□□□□ -0.39
PCDHGB1-202ENST00000611598 PLGLB1Q02325 96 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 TBC1D28Q2M2D7 210 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 OCC1Q8TAD7 63 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 METRNQ9UJH8 293 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 OOEPA6NGQ2 149 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 LTC4SQ16873 150 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 HLA-DRB5Q30154 266 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 ABHD17BQ5VST6 288 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 TOMM20LQ6UXN7 152 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 SLC25A40Q8TBP6 338 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 TMEM68Q96MH6 324 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 DCTN5Q9BTE1 182 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
PCDHGB1-202ENST00000611598 A6NNC1 897 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 SLC17A3O00476 420 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 HPRT1P00492 218 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 ZNF25P17030 456 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 KITLGP21583 273 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 TIMP3P35625 211 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 PSG7Q13046 419 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 MIC13Q5XKP0 118 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 RAB1CQ92928 201 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 MED13Q9UHV7 2174 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 PRR14LQ5THK1 2151 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 AQP7O14520 342 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 YPEL1O60688 119 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 MPV17P39210 176 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 DUSP3P51452 185 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 TREML4Q6UXN2 200 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 YPEL2Q96QA6 119 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 TAAR6Q96RI8 345 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 MGST2Q99735 147 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 HES4Q9HCC6 221 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 TMEM106BQ9NUM4 274 aa12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 YTHDF2Q9Y5A9 579 aaKnown RBP12.58□□□□□ -0.4
PCDHGB1-202ENST00000611598 F2Z2F3 143 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 CDKN1AP38936 164 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 YPEL3P61236 119 aaPredicted RBP12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 FBXW9Q5XUX1 488 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 SLC35E4Q6ICL7 350 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 MS4A5Q9H3V2 200 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 K7EN84 100 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 FOXF2Q12947 444 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 Q8TCH9 128 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 IL17BQ9UHF5 180 aa12.57□□□□□ -0.4
PCDHGB1-202ENST00000611598 PROP1O75360 226 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 SERF1AO75920 110 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 TMEM249Q2WGJ8 235 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 TPTE2P1Q5T6R2 138 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 C11orf53Q8IXP5 236 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 SSMEM1Q8WWF3 244 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 OBP2BQ9NPH6 170 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 HCFC1P51610 2035 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 FCGR3BO75015 233 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 WISP2O76076 250 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 UBE2NP61088 152 aaKnown RBP12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 PARD6AQ9NPB6 346 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 PTPRBP23467 1997 aa12.56□□□□□ -0.4
PCDHGB1-202ENST00000611598 IRF2P14316 349 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 SELENOTP62341 195 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 ZNF90Q03938 601 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 PRAMEF6Q5VXH4 476 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 SPATA31B1PQ5VZV4 182 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 MRPL18Q9H0U6 180 aaKnown RBP12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 IGHV3-13P01766 116 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 IGHV3-7P01780 117 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 OPRK1P41145 380 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 PDLIM3Q53GG5 364 aaPredicted RBP12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
PCDHGB1-202ENST00000611598 C1orf159Q96HA4 380 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms