RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SRP19P09132 144 aaKnown RBP23.07■■□□□ 1.28
CSPG5-205ENST00000610462 RELBQ01201 579 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 VWC2Q2TAL6 325 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 AWAT1Q58HT5 328 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 SOHLH1Q5JUK2 328 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 SMCO4Q9NRQ5 59 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 TMEM140Q9NV12 185 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 GNG10P50151 68 aa23.06■■□□□ 1.28
CSPG5-205ENST00000610462 PDLIM3Q53GG5 364 aaPredicted RBP23.06■■□□□ 1.28
CSPG5-205ENST00000610462 AKIRIN2Q53H80 203 aa23.06■■□□□ 1.28
CSPG5-205ENST00000610462 NEUROG1Q92886 237 aa23.06■■□□□ 1.28
CSPG5-205ENST00000610462 RCC1LQ96I51 464 aaKnown RBP23.06■■□□□ 1.28
CSPG5-205ENST00000610462 TMEM106BQ9NUM4 274 aa23.06■■□□□ 1.28
CSPG5-205ENST00000610462 C15orf62A8K5M9 175 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 HSPB1P04792 205 aaKnown RBP23.05■■□□□ 1.28
CSPG5-205ENST00000610462 CA7P43166 264 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 ETV3LQ6ZN32 361 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 SLC25A48Q6ZT89 311 aaKnown RBP23.05■■□□□ 1.28
CSPG5-205ENST00000610462 OR10A7Q8NGE5 316 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 RXFP4Q8TDU9 374 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 UNKLQ9H9P5 680 aaKnown RBP23.05■■□□□ 1.28
CSPG5-205ENST00000610462 RPS10P5Q9NQ39 176 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 RPS16P62249 146 aaKnown RBP23.05■■□□□ 1.28
CSPG5-205ENST00000610462 KHDC3LQ587J8 217 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 ZNF383Q8NA42 475 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 CCL17Q92583 94 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 GAL3ST2Q9H3Q3 398 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 DYNLRB1Q9NP97 96 aa23.05■■□□□ 1.28
CSPG5-205ENST00000610462 TET2Q6N021 2002 aaPredicted RBP23.04■■□□□ 1.28
CSPG5-205ENST00000610462 ELLP55199 621 aaPredicted RBP23.04■■□□□ 1.28
CSPG5-205ENST00000610462 AVPI1Q5T686 147 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 ZNF787Q6DD87 383 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 CLCC1Q96S66 551 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 TRAV3A0A0B4J244 114 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 C7orf77A4D0Y5 90 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 M0R036 132 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 ARG1P05089 322 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 SNRNP70P08621 437 aaKnown RBP23.04■■□□□ 1.28
CSPG5-205ENST00000610462 FGF7P21781 194 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 RPL31P62899 125 aaKnown RBP23.04■■□□□ 1.28
CSPG5-205ENST00000610462 LCN15Q6UWW0 184 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 SSX7Q7RTT5 188 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 MS4A5Q9H3V2 200 aa23.04■■□□□ 1.28
CSPG5-205ENST00000610462 KLF2Q9Y5W3 355 aaPredicted RBP23.04■■□□□ 1.28
CSPG5-205ENST00000610462 NBEAQ8NFP9 2946 aa23.03■■□□□ 1.28
CSPG5-205ENST00000610462 LOC102723971A0A1B0GUV8 181 aa23.03■■□□□ 1.28
CSPG5-205ENST00000610462 TNFRSF13BO14836 293 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-205ENST00000610462 RAB13P51153 203 aa23.03■■□□□ 1.28
CSPG5-205ENST00000610462 RPP30P78346 268 aaKnown RBP23.03■■□□□ 1.28
CSPG5-205ENST00000610462 ZNF429Q86V71 674 aa23.03■■□□□ 1.28
CSPG5-205ENST00000610462 CD3EP07766 207 aa23.02■■□□□ 1.28
CSPG5-205ENST00000610462 APOBEC3AP31941 199 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-205ENST00000610462 VDAC2P45880 294 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-205ENST00000610462 KLRB1Q12918 225 aa23.02■■□□□ 1.28
CSPG5-205ENST00000610462 FCN3O75636 299 aa23.02■■□□□ 1.28
CSPG5-205ENST00000610462 CRYBA1P05813 215 aa23.02■■□□□ 1.28
CSPG5-205ENST00000610462 DAOP14920 347 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 MDKP21741 143 aaPredicted RBP23.01■■□□□ 1.27
CSPG5-205ENST00000610462 AKR1C3P42330 323 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 EFNB3Q15768 340 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 ZCCHC14Q8WYQ9 949 aaKnown RBP23.01■■□□□ 1.27
CSPG5-205ENST00000610462 C20orf24Q9BUV8 137 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 GNG13Q9P2W3 67 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.01■■□□□ 1.27
CSPG5-205ENST00000610462 COLCA2A8K830 154 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 PAX6P26367 422 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 TFF3Q07654 80 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 RHEBQ15382 184 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 FBXL19-AS1Q494R0 122 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 ACSM6Q6P461 480 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 RHOVQ96L33 236 aa23.01■■□□□ 1.27
CSPG5-205ENST00000610462 C15orf61A6NNL5 157 aa23■■□□□ 1.27
CSPG5-205ENST00000610462 LINC00518Q8N0U6 118 aa23■■□□□ 1.27
CSPG5-205ENST00000610462 ST6GALNAC3Q8NDV1 305 aa23■■□□□ 1.27
CSPG5-205ENST00000610462 ZNF714Q96N38 554 aa23■■□□□ 1.27
CSPG5-205ENST00000610462 HEYLQ9NQ87 328 aaPredicted RBP23■■□□□ 1.27
CSPG5-205ENST00000610462 TCF19Q9Y242 345 aa23■■□□□ 1.27
CSPG5-205ENST00000610462 FGF8P55075 233 aaPredicted RBP22.99■■□□□ 1.27
CSPG5-205ENST00000610462 POU2AF1Q16633 256 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 TMEM200BQ69YZ2 307 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 OR4A47Q6IF82 309 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 LYPD2Q6UXB3 125 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 HEPN1Q6WQI6 88 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 RPP25LQ8N5L8 163 aaKnown RBP22.99■■□□□ 1.27
CSPG5-205ENST00000610462 C15orf54Q8N8G6 183 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 NPCDR1Q9BY65 106 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 CISD1Q9NZ45 108 aaKnown RBP22.99■■□□□ 1.27
CSPG5-205ENST00000610462 TLN1Q9Y490 2541 aaKnown RBP22.99■■□□□ 1.27
CSPG5-205ENST00000610462 MAP1LC3B2A6NCE7 125 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 B9A039 149 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 NDUFB3O43676 98 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 HRASP01112 189 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 IFNA10P01566 189 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 IGKV1D-33P01593 117 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 IGKV1-33P01594 117 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 MBP02144 154 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 FBP1P09467 338 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 HNF4GQ14541 408 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 OR10G4Q8NGN3 311 aa22.99■■□□□ 1.27
CSPG5-205ENST00000610462 MAP1LC3BQ9GZQ8 125 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms