RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 AGTRAPQ6RW13 159 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 DGAT2L6Q6ZPD8 337 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 Q6ZRU5 148 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 VN1R4Q7Z5H5 301 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC25A45Q8N413 288 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 ZIC4Q8N9L1 334 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 OR2T4Q8NH00 348 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 PLEKHB2Q96CS7 222 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 SPACA5Q96QH8 159 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 OR2A7Q96R45 310 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 OR52B2Q96RD2 323 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 CISHQ9NSE2 258 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 ACER3Q9NUN7 267 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 DMAC2Q9NW81 257 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 C21orf62Q9NYP8 219 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 MARCOQ9UEW3 520 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 RSL24D1Q9UHA3 163 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 SIGLEC7Q9Y286 467 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 HDGFL3Q9Y3E1 203 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 MYH10P35580 1976 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 XIRP1Q702N8 1843 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 ABCC12Q96J65 1359 aa2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 KIF26AQ9ULI4 1882 aaPredicted RBP2.35□□□□□ -2.03
SMCHD1-213ENST00000609587 NPHP4O75161 1426 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 MIA2Q96PC5 1412 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAV36DV7A0A075B6V5 113 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 IGHV3-49A0A0A0MS15 119 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAV8-2A0A0B4J237 113 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAV8-6A0A0B4J262 113 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAV26-2A0A0B4J265 109 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 A0A1B0GV50 99 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 A8MUU9 505 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 INMT-MINDY4F8WBC2 141 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 I3L4J1 428 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 PSPHP1O15172 72 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 CDRT1O95170 752 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 IGLV3-19P01714 112 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TRBV12-3P01733 135 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 CSN2P05814 226 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 UBBP0CG47 229 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 FGF6P10767 208 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 SPNP16150 400 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 CTLA4P16410 223 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF25P17030 456 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 NELFEP18615 380 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ORM2P19652 201 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 PIGPP57054 158 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 IFITM3Q01628 133 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 PLCXD2Q0VAA5 305 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 C12orf74Q32Q52 190 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 LINC00303Q3SY05 128 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 FBXL19-AS1Q494R0 122 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 MESTQ5EB52 335 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 AKR1C8PQ5T2L2 129 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TMEM236Q5W0B7 351 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 LCN8Q6JVE9 175 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 GUSBP11Q6P575 273 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 TMPPEQ6ZT21 453 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 FA2HQ7L5A8 372 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 C20orf196Q8IYI0 205 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 LYPD1Q8N2G4 141 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF664Q8N3J9 261 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 OR8B12Q8NGG6 310 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 MFSD8Q8NHS3 518 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF420Q8TAQ5 688 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF675Q8TD23 568 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF721Q8TF20 911 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 KCNS1Q96KK3 526 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 METTL26Q96S19 204 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 GPER1Q99527 375 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 SERPINI1Q99574 410 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 CHCHD7Q9BUK0 85 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 MND1Q9BWT6 205 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 CHST6Q9GZX3 395 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 HEBP1Q9NRV9 189 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 UQCC1Q9NVA1 299 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 RBFOX1Q9NWB1 397 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 CALML5Q9NZT1 146 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 DHCR7Q9UBM7 475 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 HSPB8Q9UJY1 196 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 ORC6Q9Y5N6 252 aa2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 EIF4G3O43432 1585 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-213ENST00000609587 DCCP43146 1447 aa2.34□□□□□ -2.04
SMCHD1-213ENST00000609587 TUBGCP6Q96RT7 1819 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 DNMT1P26358 1616 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM189A5PLL7 270 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 G3V2T6 193 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 TMEM250H0YL14 139 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 K7EQS6 105 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 NDUFS5O43920 106 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 TSPAN19P0C672 248 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 POLR2HP52434 150 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 MAXP61244 160 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 DAD1P61803 113 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 HPCAP84074 193 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 FABP5Q01469 135 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 PRDX4Q13162 271 aa2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 C1DQ13901 141 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-213ENST00000609587 PAFAH1B3Q15102 231 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms