RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 KCNRGQ8N5I3 272 aa10.52□□□□□ -0.73
CTSA-212ENST00000606394 RAX2Q96IS3 184 aa10.52□□□□□ -0.73
CTSA-212ENST00000606394 ZNF256Q9Y2P7 627 aaPredicted RBP10.52□□□□□ -0.73
CTSA-212ENST00000606394 UBE2J1Q9Y385 318 aaPredicted RBP10.52□□□□□ -0.73
CTSA-212ENST00000606394 MOB4Q9Y3A3 225 aa10.52□□□□□ -0.73
CTSA-212ENST00000606394 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.73
CTSA-212ENST00000606394 IGKV1D-8A0A087WSZ0 117 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 RPS10-NUDT3A0A1W2PQS6 291 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 KANTRA0A1W2PQU2 76 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 MEX3AA1L020 520 aaKnown RBP10.51□□□□□ -0.73
CTSA-212ENST00000606394 SH2D7A6NKC9 451 aaPredicted RBP10.51□□□□□ -0.73
CTSA-212ENST00000606394 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 LUMP51884 338 aaPredicted RBP10.51□□□□□ -0.73
CTSA-212ENST00000606394 AP2S1P53680 142 aaPredicted RBP10.51□□□□□ -0.73
CTSA-212ENST00000606394 SUPT4H1P63272 117 aaKnown RBP10.51□□□□□ -0.73
CTSA-212ENST00000606394 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 SPIN3Q5JUX0 258 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 ACOT7LQ6ZUV0 252 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 THNSL2Q86YJ6 484 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 OR8U1Q8NH10 309 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 SCARB1Q8WTV0 552 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 PPP1R1CQ8WVI7 109 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 CYYR1Q96J86 154 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 RDH8Q9NYR8 311 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 RCC2Q9P258 522 aaKnown RBP10.51□□□□□ -0.73
CTSA-212ENST00000606394 GLS2Q9UI32 602 aa10.51□□□□□ -0.73
CTSA-212ENST00000606394 TEX13DA0A0J9YY54 714 aaPredicted RBP10.5□□□□□ -0.73
CTSA-212ENST00000606394 C13orf42A0A1B0GVH6 325 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 CRYM-AS1A6NIL9 109 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 BCL2L11O43521 198 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 GLAP06280 429 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 PI3P19957 117 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 PSMB6P28072 239 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 NPBWR2P48146 333 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 HERV-K104P61576 105 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 EDDM3AQ14507 147 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 ZNF146Q15072 292 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 LRRC37A5PQ49AS3 106 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 ZNF660Q6AZW8 331 aaPredicted RBP10.5□□□□□ -0.73
CTSA-212ENST00000606394 DHRS11Q6UWP2 260 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 HEPN1Q6WQI6 88 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 SLC38A6Q8IZM9 456 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 FAM58AQ8N1B3 248 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 CCDC71LQ8N9Z2 235 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 INO80EQ8NBZ0 244 aaPredicted RBP10.5□□□□□ -0.73
CTSA-212ENST00000606394 SEC22AQ96IW7 307 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 GAL3ST2Q9H3Q3 398 aa10.5□□□□□ -0.73
CTSA-212ENST00000606394 RIMS4Q9H426 269 aaPredicted RBP10.5□□□□□ -0.73
CTSA-212ENST00000606394 HYDINQ4G0P3 5121 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 SEC14L6B5MCN3 397 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 BUB1B-PAK6H3BSN5 160 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 FGF16O43320 207 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 CFDP00746 253 aaPredicted RBP10.49□□□□□ -0.73
CTSA-212ENST00000606394 PRKACAP17612 351 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 NUP62P37198 522 aaPredicted RBP10.49□□□□□ -0.73
CTSA-212ENST00000606394 INSL3P51460 131 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 UCP3P55916 312 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 RBM39Q14498 530 aaKnown RBP10.49□□□□□ -0.73
CTSA-212ENST00000606394 KIR2DS1Q14954 304 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 TPTE2P1Q5T6R2 138 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 TEX38Q6PEX7 206 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 COMMD7Q86VX2 200 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 MOB3AQ96BX8 217 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 C2orf50Q96LR7 162 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 NOL4LQ96MY1 436 aaPredicted RBP10.49□□□□□ -0.73
CTSA-212ENST00000606394 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 GAR1Q9NY12 217 aaKnown RBP10.49□□□□□ -0.73
CTSA-212ENST00000606394 ZNF581Q9P0T4 197 aa10.49□□□□□ -0.73
CTSA-212ENST00000606394 FAM90A9PA6NNJ1 464 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 F8VVB4 439 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 F8VWA3 439 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 LY6LH3BQJ8 138 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 MGST3O14880 152 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 MMP23AO75900 390 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 DIRAS3O95661 229 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 IFNA21P01568 189 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 IGHG2P01859 326 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 SNRNP70P08621 437 aaKnown RBP10.48□□□□□ -0.73
CTSA-212ENST00000606394 PRRX1P54821 245 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 P2RX3P56373 397 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 HLA-DRB5Q30154 266 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 FOXRED2Q8IWF2 684 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 BATF2Q8N1L9 274 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 C5orf56Q8N8D9 126 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 NEK7Q8TDX7 302 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 DCUN1D4Q92564 292 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 TOMM40LQ969M1 308 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 DUX3Q96PT4 197 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 IFT22Q9H7X7 185 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 TAS2R3Q9NYW6 316 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 MBD2Q9UBB5 411 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 KCNIP3Q9Y2W7 256 aa10.48□□□□□ -0.73
CTSA-212ENST00000606394 TRGV10A0A0A0MS01 117 aa10.47□□□□□ -0.73
CTSA-212ENST00000606394 TRBV6-7A0A0A0MS04 114 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms