RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 SFXN3Q9BWM7 321 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 VPS13AQ96RL7 3174 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 CA6P23280 308 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 CD1BP29016 333 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 RAC1P63000 192 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 NIT1Q86X76 327 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 GMPPAQ96IJ6 420 aaPredicted RBP10.41□□□□□ -0.74
CDCA3-212ENST00000604599 VPS25Q9BRG1 176 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 OR2D2Q9H210 308 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 TRAV9-1A0A075B6T8 112 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 IGHV2-70DA0A0C4DH43 119 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 ZNF716A6NP11 495 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 NPIPB11E5RHQ5 1161 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 CLDN14O95500 239 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 NGFP01138 241 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 IGLV3-19P01714 112 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 BPIFB3P59826 476 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 RAB1CQ92928 201 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 LOXL4Q96JB6 756 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 SF3B5Q9BWJ5 86 aaKnown RBP10.41□□□□□ -0.74
CDCA3-212ENST00000604599 PROK2Q9HC23 129 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
CDCA3-212ENST00000604599 C19orf25Q9UFG5 118 aaPredicted RBP10.41□□□□□ -0.74
CDCA3-212ENST00000604599 FAM166BA8MTA8 275 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 A8MXE2 369 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 PRRX1P54821 245 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 LINC00205P59089 165 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 RAC3P60763 192 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 FXYD3Q14802 87 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 VAMP3Q15836 100 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 MIC13Q5XKP0 118 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 WDR83OSQ9Y284 106 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 IGHV3-64DA0A0J9YX35 117 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 RNF212BA8MTL3 300 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 C17orf98A8MV24 154 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 MMP23AO75900 390 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 CA2P00918 260 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 TNFSF4P23510 183 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 COLCA1Q6ZS62 124 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 ABHD3Q8WU67 409 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 V9GYV3 84 aa10.4□□□□□ -0.74
CDCA3-212ENST00000604599 C15orf62A8K5M9 175 aa10.4□□□□□ -0.75
CDCA3-212ENST00000604599 LDLRAD2Q5SZI1 272 aa10.4□□□□□ -0.75
CDCA3-212ENST00000604599 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.75
CDCA3-212ENST00000604599 BORCS7Q96B45 105 aa10.4□□□□□ -0.75
CDCA3-212ENST00000604599 C5orf30Q96GV9 206 aa10.4□□□□□ -0.75
CDCA3-212ENST00000604599 EAF1Q96JC9 268 aaPredicted RBP10.4□□□□□ -0.75
CDCA3-212ENST00000604599 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
CDCA3-212ENST00000604599 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 P0C879 139 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 STAG3L2P0CL84 134 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 STAG3L3P0CL85 134 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 OTX2P32243 289 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 MORN2Q502X0 79 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 PDLIM3Q53GG5 364 aaPredicted RBP10.39□□□□□ -0.75
CDCA3-212ENST00000604599 STUMQ69YW2 141 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 H2BFWTQ7Z2G1 175 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 DOLPP1Q86YN1 238 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 CLEC7AQ9BXN2 247 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 GSX1Q9H4S2 264 aaPredicted RBP10.39□□□□□ -0.75
CDCA3-212ENST00000604599 PRDM6Q9NQX0 595 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 MRPS16Q9Y3D3 137 aaKnown RBP10.39□□□□□ -0.75
CDCA3-212ENST00000604599 NCKAP5O14513 1909 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 IGHV2-26A0A0B4J1V2 119 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 IGHV1OR15-9A0A0B4J2B8 117 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 CXorf1O96002 111 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 CD27P26842 260 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 LINC00596Q86U02 117 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 SSMEM1Q8WWF3 244 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 PRRG4Q9BZD6 226 aa10.39□□□□□ -0.75
CDCA3-212ENST00000604599 RNASE7Q9H1E1 156 aaKnown RBP10.39□□□□□ -0.75
CDCA3-212ENST00000604599 TRBV9A0A0B4J1U6 114 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 BMPR1BO00238 502 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 GLB1P16278 677 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 RELBQ01201 579 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 HYAL1Q12794 435 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 Q56UQ5 140 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 MRGPRDQ8TDS7 321 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 TSKUQ8WUA8 353 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 CHODLQ9H9P2 273 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 NBEAQ8NFP9 2946 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 TNRC6BQ9UPQ9 1833 aaKnown RBP10.38□□□□□ -0.75
CDCA3-212ENST00000604599 OR2H2O95918 312 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 BRWD1-AS2P59051 145 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 TMEM249Q2WGJ8 235 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 ZNF718Q3SXZ3 478 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 VASH2Q86V25 355 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 KCNE4Q8WWG9 221 aa10.38□□□□□ -0.75
CDCA3-212ENST00000604599 SAA2-SAA4A0A096LPE2 208 aa10.37□□□□□ -0.75
CDCA3-212ENST00000604599 LOC102724200A0A096LPH7 203 aaPredicted RBP10.37□□□□□ -0.75
CDCA3-212ENST00000604599 IGHV1-69-2A0A0G2JMI3 117 aa10.37□□□□□ -0.75
CDCA3-212ENST00000604599 A0A0G2JMM0 328 aa10.37□□□□□ -0.75
CDCA3-212ENST00000604599 A0A1W2PPB8 328 aa10.37□□□□□ -0.75
CDCA3-212ENST00000604599 A0A1W2PRS3 328 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms