RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 BRWD1Q9NSI6 2320 aa17.98■□□□□ 0.47
SH3D19-211ENST00000604030 hCG_38984A0A1B0GV85 526 aa17.98■□□□□ 0.47
SH3D19-211ENST00000604030 IGFBP3P17936 291 aaPredicted RBP17.98■□□□□ 0.47
SH3D19-211ENST00000604030 TMEM136Q6ZRR5 245 aa17.98■□□□□ 0.47
SH3D19-211ENST00000604030 ZNF826PQ6ZT77 177 aa17.98■□□□□ 0.47
SH3D19-211ENST00000604030 SRSF12Q8WXF0 261 aaKnown RBP17.98■□□□□ 0.47
SH3D19-211ENST00000604030 NPCDR1Q9BY65 106 aa17.98■□□□□ 0.47
SH3D19-211ENST00000604030 IGHV3-21A0A0B4J1V1 117 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 HIST1H4GQ99525 98 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 ASCC3Q8N3C0 2202 aaKnown RBP17.97■□□□□ 0.47
SH3D19-211ENST00000604030 MYO16Q9Y6X6 1858 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 CELA2AP08217 269 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 CENPWQ5EE01 88 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 FAM53AQ6NSI3 398 aaPredicted RBP17.97■□□□□ 0.47
SH3D19-211ENST00000604030 SLC25A45Q8N413 288 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 OSR1Q8TAX0 266 aaPredicted RBP17.97■□□□□ 0.47
SH3D19-211ENST00000604030 SRXN1Q9BYN0 137 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 J3KRW8 73 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 ZNF324O75467 553 aaPredicted RBP17.97■□□□□ 0.47
SH3D19-211ENST00000604030 FHITP49789 147 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 OPN3Q9H1Y3 402 aaPredicted RBP17.97■□□□□ 0.47
SH3D19-211ENST00000604030 NUDT3O95989 172 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 CBLN4Q9NTU7 201 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 DOCK5Q9H7D0 1870 aa17.97■□□□□ 0.47
SH3D19-211ENST00000604030 ZNF638Q14966 1978 aaKnown RBP17.96■□□□□ 0.47
SH3D19-211ENST00000604030 RBFOX2O43251 390 aaKnown RBP eCLIP17.96■□□□□ 0.471e-8■□□□□ 9.6
SH3D19-211ENST00000604030 HOXA5P20719 270 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 C2orf83Q53S99 150 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 HCP5Q6MZN7 132 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 PCSK4Q6UW60 755 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 SAP25Q8TEE9 199 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 UBTD1Q9HAC8 227 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 DPRXA6NFQ7 191 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 ADRA2AP08913 450 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 FBLL1A6NHQ2 334 aaKnown RBP17.96■□□□□ 0.47
SH3D19-211ENST00000604030 SOD3P08294 240 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 SLC25A17O43808 307 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 NPBWR2P48146 333 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 FXYD3Q14802 87 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 ADIPOQQ15848 244 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 RTBDNQ9BSG5 229 aaPredicted RBP17.96■□□□□ 0.47
SH3D19-211ENST00000604030 SCN3AQ9NY46 2000 aa17.96■□□□□ 0.47
SH3D19-211ENST00000604030 MSGN1A6NI15 193 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 WFIKKN1Q96NZ8 548 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 SPSB2Q99619 263 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 IL6RP08887 468 aaPredicted RBP17.95■□□□□ 0.46
SH3D19-211ENST00000604030 APELAP0DMC3 54 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 UQCRFS1P47985 274 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 Q6AWC8 147 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 NPIPB7O75200 414 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 CX3CL1P78423 397 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 C19orf54Q5BKX5 351 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 ZCCHC14Q8WYQ9 949 aaKnown RBP17.95■□□□□ 0.46
SH3D19-211ENST00000604030 LRRC37AA6NMS7 1700 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 LOC105371267A0A1B0GV96 52 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 TFF2Q03403 129 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 C21orf62-AS1Q17RA5 79 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 TM4SF20Q53R12 229 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 TDRD15B5MCY1 1934 aaKnown RBP17.95■□□□□ 0.46
SH3D19-211ENST00000604030 LOC107984156A0A0G2JMH3 177 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 PPP1R17O96001 155 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 FCGR2BP31994 310 aaPredicted RBP17.95■□□□□ 0.46
SH3D19-211ENST00000604030 ARL17AQ8IVW1 177 aa17.95■□□□□ 0.46
SH3D19-211ENST00000604030 RBBP6Q7Z6E9 1792 aaKnown RBP17.94■□□□□ 0.46
SH3D19-211ENST00000604030 IGKV3D-11A0A0A0MRZ8 115 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 TM4SF5O14894 197 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 RGPD3A6NKT7 1758 aaPredicted RBP17.94■□□□□ 0.46
SH3D19-211ENST00000604030 TRAV14DV4A0A0A6YYC5 116 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 TAS2R60P59551 318 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 FAM90A1Q86YD7 464 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 SDF2L1Q9HCN8 221 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 PATE3B3GLJ2 98 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 STARD6P59095 220 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 SLC25A53Q5H9E4 307 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 PHLDA3Q9Y5J5 127 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 COL4A1P02462 1669 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 CRXO43186 299 aaPredicted RBP17.94■□□□□ 0.46
SH3D19-211ENST00000604030 GDF9O60383 454 aa17.94■□□□□ 0.46
SH3D19-211ENST00000604030 LGALS3P17931 250 aaKnown RBP17.94■□□□□ 0.46
SH3D19-211ENST00000604030 CIRBPQ14011 172 aaKnown RBP17.94■□□□□ 0.46
SH3D19-211ENST00000604030 SYNGR3O43761 229 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 ABHD12Q8N2K0 398 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 FAM131CQ96AQ9 280 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 LPAR2Q9HBW0 351 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 F8VVB4 439 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 F8VWA3 439 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 CLDND2Q8NHS1 167 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 A1L4Q6 167 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 PLAUP00749 431 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 TSPOP30536 169 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 MRPS16Q9Y3D3 137 aaKnown RBP17.93■□□□□ 0.46
SH3D19-211ENST00000604030 SHANK3Q9BYB0 1731 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 LOC102724200A0A096LPH7 203 aaPredicted RBP17.93■□□□□ 0.46
SH3D19-211ENST00000604030 RELQ04864 619 aaPredicted RBP17.93■□□□□ 0.46
SH3D19-211ENST00000604030 CACNG8Q8WXS5 425 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 GTF3AQ92664 365 aaKnown RBP17.93■□□□□ 0.46
SH3D19-211ENST00000604030 CLEC7AQ9BXN2 247 aa17.93■□□□□ 0.46
SH3D19-211ENST00000604030 PTPRFP10586 1907 aa17.92■□□□□ 0.46
SH3D19-211ENST00000604030 A0A1W2PR77 199 aa17.92■□□□□ 0.46
SH3D19-211ENST00000604030 UNQ5815/PRO19632Q6UWF5 114 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms