RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 MTCP1P56278 107 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 SRPXP78539 464 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 AESQ08117 197 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 EGFEM1PQ0D2K5 195 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 PLA2G7Q13093 441 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 PPP1R1AQ13522 171 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 ATXN7L3Q14CW9 347 aaPredicted RBP4.12□□□□□ -1.75
VRK3-226ENST00000602029 RSU1Q15404 277 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 MOGAT2Q3SYC2 334 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 KRBOX4Q5JUW0 171 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 NKAPLQ5M9Q1 402 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 LDLRAD2Q5SZI1 272 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 C9orf66Q5T8R8 295 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 ZFAND6Q6FIF0 208 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 PRSS54Q6PEW0 395 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 GLIPR1L1Q6UWM5 242 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 ASCL4Q6XD76 172 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 IL34Q6ZMJ4 242 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 LCNL1Q6ZST4 164 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 C18orf65Q6ZTR6 163 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 TMED4Q7Z7H5 227 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 MOB3BQ86TA1 216 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 LINC00596Q86U02 117 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 SAXO1Q8IYX7 474 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 SPAG16Q8N0X2 631 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 COMMD1Q8N668 190 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 DRAM1Q8N682 238 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 LRTM2Q8N967 370 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 CHST4Q8NCG5 386 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 OR5D18Q8NGL1 313 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 OR4P4Q8NGL7 312 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 MUC7Q8TAX7 377 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 NEK7Q8TDX7 302 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 RNF141Q8WVD5 230 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 LEAP2Q969E1 77 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 WDR89Q96FK6 387 aaPredicted RBP4.12□□□□□ -1.75
VRK3-226ENST00000602029 GALNT14Q96FL9 552 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 ABHD14BQ96IU4 210 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 GPER1Q99527 375 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 SMDT1Q9H4I9 107 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 ZMAT4Q9H898 229 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 PLEKHA2Q9HB19 425 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 MTCH1Q9NZJ7 389 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 C14orf166Q9Y224 244 aaKnown RBP4.12□□□□□ -1.75
VRK3-226ENST00000602029 VSIG4Q9Y279 399 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 KCNK7Q9Y2U2 307 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 UBE2J1Q9Y385 318 aaPredicted RBP4.12□□□□□ -1.75
VRK3-226ENST00000602029 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 IGHV3-72A0A0B4J1Y9 119 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 DUXBA0A1W2PPF3 345 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ODAMA1E959 279 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 BUB1B-PAK6H3BSN5 160 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 M0QYG6 137 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 DEGS1O15121 323 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SSX5O60225 188 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 PSPNO60542 156 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ZNF737O75373 536 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 CRTAPO75718 401 aaPredicted RBP4.11□□□□□ -1.75
VRK3-226ENST00000602029 JTBO76095 146 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 DIRAS3O95661 229 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 OR2H2O95918 312 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 IFNA21P01568 189 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 IGKV1D-33P01593 117 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 IGKV1-33P01594 117 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 RLN2P04090 185 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 GLAP06280 429 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 CTSDP07339 412 aaPredicted RBP4.11□□□□□ -1.75
VRK3-226ENST00000602029 TMEM225BP0DP42 221 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 PTHLHP12272 177 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 VDAC1P21796 283 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 OR3A1P47881 315 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 GLIPR1P48060 266 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 NPBWR2P48146 333 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 UCP3P55916 312 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ARFRP1Q13795 201 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SMCO1Q147U7 214 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 HMGN3Q15651 99 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 HLA-DRB5Q30154 266 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SPIN3Q5JUX0 258 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 TMEM42Q69YG0 159 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ELP2Q6IA86 826 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 TEX38Q6PEX7 206 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 ALKAL2Q6UX46 152 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 TCF23Q7RTU1 214 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SGPP2Q8IWX5 399 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 BAP18Q8IXM2 172 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 FAM71E2Q8N5Q1 922 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 OR51T1Q8NGJ9 327 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 OR10K1Q8NGX5 313 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 OR8U1Q8NH10 309 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 WIPF2Q8TF74 440 aaPredicted RBP4.11□□□□□ -1.75
VRK3-226ENST00000602029 ARL11Q969Q4 196 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 MRGPRFQ96AM1 343 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 C2orf50Q96LR7 162 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 Q96M66 194 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SPACA5Q96QH8 159 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 OR5B12Q96R08 314 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 RASL11BQ9BPW5 248 aa4.11□□□□□ -1.75
VRK3-226ENST00000602029 SELENOIQ9C0D9 397 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms