RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 LINC00311Q8N616 119 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 OR1S2Q8NGQ3 325 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 SIRT7Q9NRC8 400 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
HIF3A-218ENST00000600383 KLF2Q9Y5W3 355 aaPredicted RBP12.35□□□□□ -0.43
HIF3A-218ENST00000600383 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 OVOL3O00110 214 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 SHOXO15266 292 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 APOA2P02652 100 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 PRRX1P54821 245 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 RPS16P62249 146 aaKnown RBP12.34□□□□□ -0.43
HIF3A-218ENST00000600383 RELBQ01201 579 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 TGIF2LXQ8IUE1 241 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 C8orf46Q8TAG6 207 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 CCL19Q99731 98 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 NUP50Q9UKX7 468 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 LRRK2Q5S007 2527 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 SRRM4A7MD48 611 aaKnown RBP12.34□□□□□ -0.43
HIF3A-218ENST00000600383 ZNF705EA8MWA4 302 aaPredicted RBP12.34□□□□□ -0.43
HIF3A-218ENST00000600383 TLE4Q04727 773 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 ZNF266Q14584 549 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 OR8G2PQ6IF36 304 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 ZNF596Q8TC21 504 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 ST6GALNAC6Q969X2 333 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 BPESC1Q9GZL8 116 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
HIF3A-218ENST00000600383 H0YJW9 148 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 TAS2R30P59541 319 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.44
HIF3A-218ENST00000600383 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 PNKDQ8N490 385 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 LY6G5BQ8NDX9 201 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 LHX4Q969G2 390 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 RFNGQ9Y644 331 aa12.33□□□□□ -0.44
HIF3A-218ENST00000600383 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 IGHV4-39P01824 125 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 IL3RAP26951 378 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 SLC25A24Q6NUK1 477 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 OR5AN1Q8NGI8 311 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
HIF3A-218ENST00000600383 NABP2Q9BQ15 211 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 GINS3Q9BRX5 216 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 PLA2G2EQ9NZK7 142 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 AUP1Q9Y679 476 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 WNK2Q9Y3S1 2297 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 FAM90A9PA6NNJ1 464 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 ENSAO43768 121 aaKnown RBP12.32□□□□□ -0.44
HIF3A-218ENST00000600383 OPN1MWP04001 364 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 OPN1MW2P0DN77 364 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 OPN1MW3P0DN78 364 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 ZFP36P26651 326 aaKnown RBP12.32□□□□□ -0.44
HIF3A-218ENST00000600383 HLA-DRB5Q30154 266 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 Q8N7P7 452 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
HIF3A-218ENST00000600383 CIB3Q96Q77 187 aaPredicted RBP12.32□□□□□ -0.44
HIF3A-218ENST00000600383 STRAPQ9Y3F4 350 aaKnown RBP12.32□□□□□ -0.44
HIF3A-218ENST00000600383 IGLV1-47P01700 117 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 MYOD1P15172 320 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 SPCS3P61009 180 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 LCN2P80188 198 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 DHRS7BQ6IAN0 325 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-218ENST00000600383 LILRB2Q8N423 598 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 LRRC20Q8TCA0 184 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 OR4C12Q96R67 309 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 ATP5SQ99766 215 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 HINT2Q9BX68 163 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 ARV1Q9H2C2 271 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-218ENST00000600383 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 I3L521 148 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 FGF16O43320 207 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 RBP4P02753 201 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 HBG1P69891 147 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 HBG2P69892 147 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 SP5Q6BEB4 398 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-218ENST00000600383 HAPLN4Q86UW8 402 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 TNFRSF14Q92956 283 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 BARX1Q9HBU1 254 aaPredicted RBP12.31□□□□□ -0.44
HIF3A-218ENST00000600383 TMA7Q9Y2S6 64 aaKnown RBP12.31□□□□□ -0.44
HIF3A-218ENST00000600383 INSIG2Q9Y5U4 225 aa12.31□□□□□ -0.44
HIF3A-218ENST00000600383 UBR5O95071 2799 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-218ENST00000600383 C15orf61A6NNL5 157 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 DFFBO76075 338 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 GOSR1O95249 250 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 IFNA5P01569 189 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 IGHV2-5P01817 119 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 SEC11BP0C7V7 166 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 SAA1P0DJI8 122 aaPredicted RBP12.3□□□□□ -0.44
HIF3A-218ENST00000600383 SPP1P10451 314 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 ATP6V0CP27449 155 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 ARHGDIBP52566 201 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 RUNX1Q01196 453 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 AANATQ16613 207 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 TMEM14EPQ6UXP3 125 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 OR4C13Q8NGP0 309 aa12.3□□□□□ -0.44
HIF3A-218ENST00000600383 OSR1Q8TAX0 266 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms