RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	CHST1	O43916	411 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	RAMP3	O60896	148 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	ATG12	O94817	140 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	BRWD1-AS2	P59051	145 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	TMEM187	Q14656	261 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	TMEM177	Q53S58	311 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	LIAT1	Q6ZQX7	453 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	OSR1	Q8TAX0	266 aa	Predicted RBP	17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	ZNF431	Q8TF32	576 aa	Predicted RBP	17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	GLYATL2	Q8WU03	294 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	RNF5	Q99942	180 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	SEC22C	Q9BRL7	303 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	AIFM2	Q9BRQ8	373 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	PLEKHA2	Q9HB19	425 aa		17.55	■□□□□ 0.4
LTBP4-227	ENST00000600026	SHOX	O15266	292 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	DUS4L	O95620	317 aa	Known RBP	17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	HRAS	P01112	189 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	TMEM11	P17152	192 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	EBI3	Q14213	229 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	ZNF585B	Q52M93	769 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	ZNF695	Q8IW36	515 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	LGI3	Q8N145	548 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	OR52B4	Q8NGK2	314 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	COQ8A	Q8NI60	647 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	EAF1	Q96JC9	268 aa	Predicted RBP	17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	COMMD9	Q9P000	198 aa		17.54	■□□□□ 0.4
LTBP4-227	ENST00000600026	SNRPGP15	A8MWD9	76 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	CREBL2	O60519	120 aa	Predicted RBP	17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	S1PR2	O95136	353 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	IGKV1-16	P04430	117 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	LGALS7	P47929	136 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	TATDN3	Q17R31	274 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	RBMXL1	Q96E39	390 aa	Known RBP	17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	HARBI1	Q96MB7	349 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	TSNAX	Q99598	290 aa	Known RBP	17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	PHB2	Q99623	299 aa		17.53	■□□□□ 0.4
LTBP4-227	ENST00000600026	CDS2	O95674	445 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	NQO2	P16083	231 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	RPL15	P61313	204 aa	Known RBP	17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	ERVK-16	P61578	105 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	HNF4G	Q14541	408 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	TAF15	Q92804	592 aa	Known RBP eCLIP	17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	RBPMS	Q93062	196 aa	Known RBP	17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	IL22RA2	Q969J5	263 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	R3HDM4	Q96D70	268 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	TMEM56	Q96MV1	263 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	SLC25A33	Q9BSK2	321 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	RAB18	Q9NP72	206 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	TMEM56-RWDD3	S4R434	201 aa		17.52	■□□□□ 0.4
LTBP4-227	ENST00000600026	COL6A5	A8TX70	2615 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026		A0A0B4J2A0	478 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	OR2F2	O95006	317 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	ANKRD55	Q3KP44	614 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	TMEM268	Q5VZI3	342 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	SELENOH	Q8IZQ5	122 aa	Known RBP	17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	C12orf45	Q8N5I9	185 aa	Predicted RBP	17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	MITD1	Q8WV92	249 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	PRR13	Q9NZ81	148 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	C1RL	Q9NZP8	487 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	SHPK	Q9UHJ6	478 aa		17.51	■□□□□ 0.39
LTBP4-227	ENST00000600026	CRYBA1	P05813	215 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	VMA21	Q3ZAQ7	101 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	C16orf82	Q7Z2V1	217 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026		Q8N6K4	173 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	LRTM2	Q8N967	370 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	DMBX1	Q8NFW5	382 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	OR8H1	Q8NGG4	311 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	RNASE11	Q8TAA1	199 aa	Known RBP	17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	TMEM158	Q8WZ71	300 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	RBM14	Q96PK6	669 aa	Known RBP	17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	C19orf24	Q9BVV8	132 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	KIAA1456	Q9P272	454 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	ALG5	Q9Y673	324 aa		17.5	■□□□□ 0.39
LTBP4-227	ENST00000600026	DUXB	A0A1W2PPF3	345 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	C7orf66	A4D0T2	115 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	SPDEF	O95238	335 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	KRAS	P01116	189 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	IGKV1-39	P01597	117 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	IGKV1D-39	P04432	117 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	AKR1C2	P52895	323 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	MMD	Q15546	238 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	UXS1	Q8NBZ7	420 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	LHFPL5	Q8TAF8	219 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	RRNAD1	Q96FB5	475 aa	Known RBP	17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026	OR51J1	Q9H342	316 aa		17.49	■□□□□ 0.39
LTBP4-227	ENST00000600026		A0A0B4J293	547 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	MARCH11	A6NNE9	402 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	NBR2	O15453	112 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	HKR1	P10072	659 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	G6PC	P35575	357 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	RELB	Q01201	579 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	LIN54	Q6MZP7	749 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	SSX9	Q7RTT3	188 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	VSTM2A	Q8TAG5	236 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	RITA1	Q96K30	269 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	RHOV	Q96L33	236 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	MOB4	Q9Y3A3	225 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	STAB1	Q9NY15	2570 aa		17.48	■□□□□ 0.39
LTBP4-227	ENST00000600026	NCBP2L	A6PVI3	153 aa	Known RBP	17.47	■□□□□ 0.39
LTBP4-227	ENST00000600026	SRRM4	A7MD48	611 aa	Known RBP	17.47	■□□□□ 0.39

Retrieved 100 of 20,778 RNA–protein pairs in 84 ms