RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
VRK3-217ENST00000599538 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 FAM216AQ8WUB2 273 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 SFT2D1Q8WV19 159 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 TMEM140Q9NV12 185 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 C15orf62A8K5M9 175 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 DVL1O14640 695 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 MYOD1P15172 320 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 NQO2P16083 231 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 EFNB3Q15768 340 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 ZNF726P1Q15940 193 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 COMMD1Q8N668 190 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 C17orf50Q8WW18 174 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 RAB9BQ9NP90 201 aa11.86□□□□□ -0.51
VRK3-217ENST00000599538 TACC2O95359 2948 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 IGHV1-69-2A0A0G2JMI3 117 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 B9A039 149 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 CT45A6P0DMU7 189 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 CT45A5P0DMU8 189 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 CT45A7P0DMV0 189 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
VRK3-217ENST00000599538 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
VRK3-217ENST00000599538 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 COL8A2P25067 703 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 ELLP55199 621 aaPredicted RBP11.84□□□□□ -0.51
VRK3-217ENST00000599538 PEA15Q15121 130 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 HAGHQ16775 308 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 MUC15Q8N387 334 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
VRK3-217ENST00000599538 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 OR4S2Q8NH73 311 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 RHOVQ96L33 236 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 AIFM2Q9BRQ8 373 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 LOC105371267A0A1B0GV96 52 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 OR13C7P0DN81 318 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 LOXP28300 417 aaPredicted RBP11.84□□□□□ -0.51
VRK3-217ENST00000599538 ERVK-16P61578 105 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 MEF2CQ06413 473 aaPredicted RBP11.84□□□□□ -0.51
VRK3-217ENST00000599538 TFF3Q07654 80 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 CA5BP1Q8WTZ4 195 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
VRK3-217ENST00000599538 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
VRK3-217ENST00000599538 NDUFB3O43676 98 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 SNAPINO95295 136 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 FBP1P09467 338 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 THBS3P49746 956 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 DIAPH2-AS1Q14236 149 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 CLRN3Q8NCR9 226 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 OR10P1Q8NGE3 313 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 CIB3Q96Q77 187 aaPredicted RBP11.83□□□□□ -0.52
VRK3-217ENST00000599538 PSMG3Q9BT73 122 aaPredicted RBP11.83□□□□□ -0.52
VRK3-217ENST00000599538 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 RBFOX3A6NFN3 312 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 RRHO14718 337 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 LY6HO94772 140 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 AKR1C3P42330 323 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 VDAC2P45880 294 aaPredicted RBP11.83□□□□□ -0.52
VRK3-217ENST00000599538 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
VRK3-217ENST00000599538 DLX1P56177 255 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 LRRC10Q5BKY1 277 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 ABHD12Q8N2K0 398 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 LFNGQ8NES3 379 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 TMEM170AQ8WVE7 144 aa11.83□□□□□ -0.52
VRK3-217ENST00000599538 FAM90A9PA6NNJ1 464 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 ARG1P05089 322 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 OR8U8P0C7N1 319 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 ATF4P18848 351 aaPredicted RBP11.82□□□□□ -0.52
VRK3-217ENST00000599538 REG1BP48304 166 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 SPCS3P61009 180 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 ZNF672Q499Z4 452 aaPredicted RBP11.82□□□□□ -0.52
VRK3-217ENST00000599538 ACSM6Q6P461 480 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 RCC1LQ96I51 464 aaKnown RBP11.82□□□□□ -0.52
VRK3-217ENST00000599538 PBDC1Q9BVG4 233 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
VRK3-217ENST00000599538 KIAA1456Q9P272 454 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 TCF19Q9Y242 345 aa11.82□□□□□ -0.52
VRK3-217ENST00000599538 RAB2AP61019 212 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 PRB3Q04118 309 aaPredicted RBP11.81□□□□□ -0.52
VRK3-217ENST00000599538 TLE4Q04727 773 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 UNQ6494/PRO21346Q6UXR6 183 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 C20orf24Q9BUV8 137 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 MRPL20Q9BYC9 149 aaKnown RBP11.81□□□□□ -0.52
VRK3-217ENST00000599538 PRORYQ9H606 182 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 KAAG1Q9UBP8 84 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 KPTNQ9Y664 436 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 PKD1L2Q7Z442 2459 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 A0A1B0GW64 132 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 C15orf61A6NNL5 157 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 DEFA4P12838 97 aa11.81□□□□□ -0.52
VRK3-217ENST00000599538 DAOP14920 347 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms