RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 SAP30O75446 220 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 LY86O95711 162 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 HSPB1P04792 205 aaKnown RBP11.31□□□□□ -0.6
XRCC1-208ENST00000598422 APELAP0DMC3 54 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 PTHLHP12272 177 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 SSBP2P81877 361 aaPredicted RBP11.31□□□□□ -0.6
XRCC1-208ENST00000598422 CD69Q07108 199 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 CDK10Q15131 360 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 ZNF66Q6ZN08 573 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 ZNF429Q86V71 674 aa11.31□□□□□ -0.6
XRCC1-208ENST00000598422 SRSF12Q8WXF0 261 aaKnown RBP11.31□□□□□ -0.6
XRCC1-208ENST00000598422 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
XRCC1-208ENST00000598422 PPYP01298 95 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 IGLV2-14P01704 120 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 KIR2DS2P43631 304 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 TAS2R20P59543 309 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 FXYD4P59646 89 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 HERV-K104P61576 105 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 NCS1P62166 190 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
XRCC1-208ENST00000598422 MMD2Q8IY49 270 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 VSTM2AQ8TAG5 236 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 SNAPC3Q92966 411 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
XRCC1-208ENST00000598422 SLC25A46Q96AG3 418 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 RHOVQ96L33 236 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 PRR25Q96S07 402 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 SPIN2AQ99865 258 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 SPIN2BQ9BPZ2 258 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 FUNDC2Q9BWH2 189 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 SLC5A7Q9GZV3 580 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
XRCC1-208ENST00000598422 SCOCQ9UIL1 159 aa11.3□□□□□ -0.6
XRCC1-208ENST00000598422 ZNF256Q9Y2P7 627 aaPredicted RBP11.3□□□□□ -0.6
XRCC1-208ENST00000598422 TRIM64CA6NLI5 447 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 TNFSF12O43508 249 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 ZP3P21754 424 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 CATR1Q13166 79 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 MSMO1Q15800 293 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 TMEM17Q86X19 198 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 VKORC1L1Q8N0U8 176 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 MFSD4AQ8N468 514 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 TINAGL1Q9GZM7 467 aaPredicted RBP11.29□□□□□ -0.6
XRCC1-208ENST00000598422 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
XRCC1-208ENST00000598422 CCL28Q9NRJ3 127 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 DNAH3Q8TD57 4116 aa11.29□□□□□ -0.6
XRCC1-208ENST00000598422 SMIM31A0A1B0GVY4 71 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 ANKRD34BA5PLL1 514 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 OR2A4O95047 310 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 HRASP01112 189 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 OR9G9P0C7N8 305 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 TAS2R46P59540 309 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 VBP1P61758 197 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 USMG5Q96IX5 58 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 OR2A7Q96R45 310 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 OR4C12Q96R67 309 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 AIFM2Q9BRQ8 373 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
XRCC1-208ENST00000598422 DPPA5A6NC42 116 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 BRI3O95415 125 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 PRSS3P35030 304 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 DEFA5Q01523 94 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 EIF4EBP1Q13541 118 aaPredicted RBP11.27□□□□□ -0.61
XRCC1-208ENST00000598422 MRGPRG-AS1Q2M3A8 158 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 C10orf55Q5SWW7 151 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 AADACL3Q5VUY0 350 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 SSX9Q7RTT3 188 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 SPAG16Q8N0X2 631 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
XRCC1-208ENST00000598422 OR6Q1Q8NGQ2 317 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 OR5H2Q8NGV7 314 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 B9D2Q9BPU9 175 aa11.27□□□□□ -0.61
XRCC1-208ENST00000598422 FAM223BA6NKX1 122 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 SULT1C2O00338 296 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 KBTBD11O94819 623 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 APOA1P02647 267 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 EIF4EP06730 217 aaKnown RBP11.26□□□□□ -0.61
XRCC1-208ENST00000598422 RPL27AP46776 148 aaKnown RBP11.26□□□□□ -0.61
XRCC1-208ENST00000598422 RHOGP84095 191 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 SLC25A42Q86VD7 318 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 FAM223AQ8IWN6 122 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 OR51H1Q8NH63 302 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 GIMAP1Q8WWP7 306 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 AP3S1Q92572 193 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 RSRP1Q9BUV0 290 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 HRASLSQ9HDD0 168 aa11.26□□□□□ -0.61
XRCC1-208ENST00000598422 RBFOX2O43251 390 aaKnown RBP eCLIP11.25□□□□□ -0.61
XRCC1-208ENST00000598422 PMP2P02689 132 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 MAS1LP35410 378 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 RORCP51449 518 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 ACSM6Q6P461 480 aa11.25□□□□□ -0.61
XRCC1-208ENST00000598422 ZNF818PQ6ZRF7 136 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms