RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	FCGR3B	O75015	233 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	HLA-A	P01891	365 aa	Known RBP	7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	IFNA6	P05013	189 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	RAB6A	P20340	208 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	EDN2	P20800	178 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	MYL9	P24844	172 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	RANBP1	P43487	201 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	MECP2	P51608	486 aa	Known RBP	7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	CD81	P60033	236 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	RPL30	P62888	115 aa	Known RBP	7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	ATP5G2	Q06055	141 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	TBCE	Q15813	527 aa	Predicted RBP	7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	CD300E	Q496F6	205 aa	Predicted RBP	7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	NR2C2AP	Q86WQ0	139 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	FAM223A	Q8IWN6	122 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	VKORC1L1	Q8N0U8	176 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	OSR1	Q8TAX0	266 aa	Predicted RBP	7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	DCUN1D5	Q9BTE7	237 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	WFDC10A	Q9H1F0	79 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	ATG5	Q9H1Y0	275 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	PEMT	Q9UBM1	199 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	SELENOK	Q9Y6D0	94 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	TNC	P24821	2201 aa		7.97	□□□□□ -1.13
LSM4-205	ENST00000597776	BIRC6	Q9NR09	4857 aa		7.96	□□□□□ -1.13
LSM4-205	ENST00000597776	HYDIN	Q4G0P3	5121 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	HMX3	A6NHT5	357 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	PPP5D1	E7EU14	171 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	TUSC2	O75896	110 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	OR2J3	O76001	311 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	ACTL6B	O94805	426 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	CD7	P09564	240 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	RAB3B	P20337	219 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	NFYA	P23511	347 aa	Predicted RBP	7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	CDK10	Q15131	360 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	C22orf42	Q6IC83	251 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776		Q6ZS49	121 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	KCTD9	Q7L273	389 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	ZNF367	Q7RTV3	350 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	ZNF645	Q8N7E2	425 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	DYNLRB2	Q8TF09	96 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	SPIN2A	Q99865	258 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	SPIN2B	Q9BPZ2	258 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	NEURL2	Q9BR09	285 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	ST6GALNAC5	Q9BVH7	336 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	HIPK2	Q9H2X6	1198 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	NDUFB11	Q9NX14	153 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	CEPT1	Q9Y6K0	416 aa		7.96	□□□□□ -1.14
LSM4-205	ENST00000597776	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	IGKV1D-13	A0A0B4J2D9	117 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	RBMY1B	A6NDE4	496 aa	Known RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	METTL21EP	A6NDL7	271 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	RBMY1E	A6NEQ0	496 aa	Known RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	ZNF785	A8K8V0	405 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	TEX22	C9J3V5	150 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	AIRE	O43918	545 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	TPPP	O94811	219 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	IGLV2-14	P01704	120 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	IGHV3-23	P01764	117 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	RBMY1D	P0C7P1	496 aa	Known RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	IGKV1-13	P0DP09	117 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	DTYMK	P23919	212 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	GUCA2B	Q16661	112 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	C15orf32	Q32M92	178 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	CDNF	Q49AH0	187 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	LINC00322	Q6ZN03	302 aa	Predicted RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	MMD2	Q8IY49	270 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	TTC9C	Q8N5M4	171 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	DEFB125	Q8N687	156 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	NECAP1	Q8NC96	275 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	OR2K2	Q8NGT1	345 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	NUDCD2	Q8WVJ2	157 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	CNBD2	Q96M20	576 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	GPHA2	Q96T91	129 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	RBMX2	Q9Y388	322 aa	Known RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	OR2W1	Q9Y3N9	320 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	DMRT1	Q9Y5R6	373 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776		S4R3C0	116 aa		7.95	□□□□□ -1.14
LSM4-205	ENST00000597776	PLEC	Q15149	4684 aa	Known RBP	7.95	□□□□□ -1.14
LSM4-205	ENST00000597776		A0A1B0GW64	132 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	TRDV1	A0A1B0GX56	115 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	TMEM235	A6NFC5	223 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	C2orf70	A6NJV1	201 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776		E7EUB6	86 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	CREBL2	O60519	120 aa	Predicted RBP	7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	OR2C1	O95371	312 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	HLA-DQB1	P01920	261 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	FOLR2	P14207	255 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	DEFB114	Q30KQ6	69 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	HACD4	Q5VWC8	232 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	IZUMO2	Q6UXV1	221 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	TCTEX1D2	Q8WW35	142 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	CACNG8	Q8WXS5	425 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	WDR89	Q96FK6	387 aa	Predicted RBP	7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	FYTTD1	Q96QD9	318 aa	Known RBP	7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	SRD5A3	Q9H8P0	318 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	FBXL7	Q9UJT9	491 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	SPATA2	Q9UM82	520 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	ZNF257	Q9Y2Q1	563 aa		7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	MRPS7	Q9Y2R9	242 aa	Known RBP	7.94	□□□□□ -1.14
LSM4-205	ENST00000597776	PRELID3B	Q9Y3B1	194 aa		7.94	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms