RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 LIN54Q6MZP7 749 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 PPP1R27Q86WC6 154 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 CCDC71LQ8N9Z2 235 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 TEX45Q8NA69 505 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
VRK3-211ENST00000596445 AIFM2Q9BRQ8 373 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 RTBDNQ9BSG5 229 aaPredicted RBP6.62□□□□□ -1.35
VRK3-211ENST00000596445 FBXL15Q9H469 300 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 C5orf66Q9H5L9 145 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 PLEKHA2Q9HB19 425 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 SERTAD4Q9NUC0 356 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 COPZ2Q9P299 210 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 SIGLEC9Q9Y336 463 aa6.62□□□□□ -1.35
VRK3-211ENST00000596445 LINC00854A0A1B0GVQ3 168 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 FCN1O00602 326 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 PLA2G10O15496 165 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 B3GALNT1O75752 331 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 UPK1BO75841 260 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 CRYGBP07316 175 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
VRK3-211ENST00000596445 VSIG10L2P0DP72 767 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 NQO2P16083 231 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 PROK1P58294 105 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 TAS2R31P59538 309 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 RBMS2Q15434 407 aaKnown RBP6.61□□□□□ -1.35
VRK3-211ENST00000596445 ZNF585BQ52M93 769 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 C12orf54Q6X4T0 127 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 SLC35E3Q7Z769 313 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 RHOVQ96L33 236 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 HSPB9Q9BQS6 159 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 WNT10AQ9GZT5 417 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 TPSG1Q9NRR2 321 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 COMMD9Q9P000 198 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 VSIG4Q9Y279 399 aa6.61□□□□□ -1.35
VRK3-211ENST00000596445 IGHV7-81A0A0B4J1V7 117 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 TEX13DA0A0J9YY54 714 aaPredicted RBP6.6□□□□□ -1.35
VRK3-211ENST00000596445 C3orf85A0A1B0GTC6 90 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 CRYM-AS1A6NIL9 109 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 LINC01548A6NM66 108 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 H0Y980 276 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 HAX1O00165 279 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 AP4M1O00189 453 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 LYRM1O43325 122 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 CREBL2O60519 120 aaPredicted RBP6.6□□□□□ -1.35
VRK3-211ENST00000596445 OR2A4O95047 310 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 S1PR2O95136 353 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 NDUFB6O95139 128 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 SERPINE2P07093 398 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 RPA2P15927 270 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 BTCP35070 178 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 LPAR6P43657 344 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 CCR6P51684 374 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 CX3CL1P78423 397 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 POU2AF1Q16633 256 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 TMEM95Q3KNT9 176 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 FOXRED2Q8IWF2 684 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 VKORC1L1Q8N0U8 176 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 PUSL1Q8N0Z8 303 aaKnown RBP6.6□□□□□ -1.35
VRK3-211ENST00000596445 CADM3Q8N126 398 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 ADAD2Q8NCV1 583 aaKnown RBP6.6□□□□□ -1.35
VRK3-211ENST00000596445 VSTM2AQ8TAG5 236 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 CHPT1Q8WUD6 406 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 R3HDM4Q96D70 268 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 OR2A7Q96R45 310 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 TP53RKQ96S44 253 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 CLCC1Q96S66 551 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 OR51J1Q9H342 316 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 ZNF580Q9UK33 172 aa6.6□□□□□ -1.35
VRK3-211ENST00000596445 MARCH11A6NNE9 402 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 KBTBD11O94819 623 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 CNIH1O95406 144 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 CA2P00918 260 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 KRASP01116 189 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 IGF1P05019 195 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 AKR1C4P17516 323 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 UCP1P25874 307 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 ERVK-16P61578 105 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 PJVKQ0ZLH3 352 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 ASAH1Q13510 395 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 PRSS8Q16651 343 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 MRGPRG-AS1Q2M3A8 158 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 OR4A47Q6IF82 309 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 MZT2BQ6NZ67 158 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 SSX9Q7RTT3 188 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 CENPVQ7Z7K6 275 aaPredicted RBP6.59□□□□□ -1.35
VRK3-211ENST00000596445 SGPP2Q8IWX5 399 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 MMD2Q8IY49 270 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 STPG2Q8N412 459 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 KLHDC1Q8N7A1 406 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 C3orf56Q8N813 242 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 DMBX1Q8NFW5 382 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 OR4A5Q8NH83 315 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 SPATA3Q8NHX4 192 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 TMEM167AQ8TBQ9 72 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.35
VRK3-211ENST00000596445 NOL4LQ96MY1 436 aaPredicted RBP6.59□□□□□ -1.35
VRK3-211ENST00000596445 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 GON7Q9BXV9 100 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms