RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 GABRA2P47869 451 aa12.77□□□□□ -0.37
ZNF541-205ENST00000595558 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
ZNF541-205ENST00000595558 KCNIP1Q9NZI2 227 aa12.77□□□□□ -0.37
ZNF541-205ENST00000595558 WASF3Q9UPY6 502 aa12.77□□□□□ -0.37
ZNF541-205ENST00000595558 DCHS2Q6V1P9 2916 aa12.77□□□□□ -0.37
ZNF541-205ENST00000595558 A8MWP6 167 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 MLNRO43193 412 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 RAC2P15153 192 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 COX5AP20674 150 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 MSMO1Q15800 293 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 DNLZQ5SXM8 178 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 PRAMEF6Q5VXH4 476 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 C11orf53Q8IXP5 236 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 OR2T10Q8NGZ9 312 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 TMEM170AQ8WVE7 144 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 QTRT1Q9BXR0 403 aaKnown RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 OBP2BQ9NPH6 170 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 TMEM30CPA0ZSE6 113 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 K7EM74 188 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 IGHV3-13P01766 116 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 OR4A8P0C604 315 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 C1QTNF9P0C862 333 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 GNB1P62873 340 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 SSX2Q16385 188 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 FAM78BQ5VT40 261 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 TGIF2LYQ8IUE0 185 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 Q8IYB0 196 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 NEIL1Q96FI4 390 aaPredicted RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 TAAR6Q96RI8 345 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 OPN3Q9H1Y3 402 aaPredicted RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 PATZ1Q9HBE1 687 aaKnown RBP12.76□□□□□ -0.37
ZNF541-205ENST00000595558 ASCL3Q9NQ33 180 aa12.76□□□□□ -0.37
ZNF541-205ENST00000595558 EDDM3BP56851 147 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 Q3ZCU0 254 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 COA6Q5JTJ3 125 aaKnown RBP12.75□□□□□ -0.37
ZNF541-205ENST00000595558 H2BFWTQ7Z2G1 175 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 OR13A1Q8NGR1 328 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 C15orf62A8K5M9 175 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 SOX15O60248 233 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 IFNA10P01566 189 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 OR9G9P0C7N8 305 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
ZNF541-205ENST00000595558 CST9LP1Q5W188 147 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 VKORC1L1Q8N0U8 176 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 TMEM178AQ8NBL3 297 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 NANOS1Q8WY41 292 aaKnown RBP12.75□□□□□ -0.37
ZNF541-205ENST00000595558 MANBALQ9NQG1 85 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 OR6C3Q9NZP0 311 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 PSG11Q9UQ72 335 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 IGF2RP11717 2491 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 ATRXP46100 2492 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 NUPR1O60356 82 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 GGCTO75223 188 aaKnown RBP12.75□□□□□ -0.37
ZNF541-205ENST00000595558 NDUFB4O95168 129 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 HNF1AP20823 631 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 CDC34P49427 236 aaPredicted RBP12.75□□□□□ -0.37
ZNF541-205ENST00000595558 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 LINC01551Q86U37 167 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 ZNF709Q8N972 641 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 KLF14Q8TD94 323 aaPredicted RBP12.75□□□□□ -0.37
ZNF541-205ENST00000595558 FAM234AQ9H0X4 552 aa12.75□□□□□ -0.37
ZNF541-205ENST00000595558 IL3RAP26951 378 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 CD82P27701 267 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 SDSLQ96GA7 329 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 MARCH11A6NNE9 402 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 MKRN2OSH3BPM6 223 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 SLC31A2O15432 143 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 PROP1O75360 226 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 CLDN14O95500 239 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 MBP02144 154 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 SELLP14151 372 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 PDLIM4P50479 330 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 GABRA6Q16445 453 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 FAM214BQ7L5A3 538 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 TCF23Q7RTU1 214 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 TMEM256Q8N2U0 113 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 NINJ1Q92982 152 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 MRPL37Q9BZE1 423 aaKnown RBP12.74□□□□□ -0.37
ZNF541-205ENST00000595558 HES4Q9HCC6 221 aa12.74□□□□□ -0.37
ZNF541-205ENST00000595558 ZGRF1Q86YA3 2104 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 TRBV20OR9-2A0A075B6H5 130 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.37
ZNF541-205ENST00000595558 CATR1Q13166 79 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 VWC2Q2TAL6 325 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 ANAPC16Q96DE5 110 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 OOEPA6NGQ2 149 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 TM4SF5O14894 197 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
ZNF541-205ENST00000595558 CLCF1Q9UBD9 225 aa12.73□□□□□ -0.37
ZNF541-205ENST00000595558 RAB29O14966 203 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 CD33P20138 364 aa12.72□□□□□ -0.37
ZNF541-205ENST00000595558 MRPL41Q8IXM3 137 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms