RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 KCNJ3P48549 501 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 RPL14P50914 215 aaKnown RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 GZMMP51124 257 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 NUTF2P61970 127 aaKnown RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 MICAQ29983 383 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 BCL2L15Q5TBC7 163 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 OGFRL1Q5TC84 451 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 GLT8D1Q68CQ7 371 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 SIGIRRQ6IA17 410 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 FAM71F2Q6NXP2 309 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 Q6ZSR3 168 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 PDPNQ86YL7 162 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 ELMOD2Q8IZ81 293 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 PQLC1Q8N2U9 271 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 ZNF709Q8N972 641 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 TMEM37Q8WXS4 190 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 ADAT3Q96EY9 351 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 VSIG2Q96IQ7 327 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 TXN2Q99757 166 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 ROPN1BQ9BZX4 212 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 SLC35B3Q9H1N7 401 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 OR51V1Q9H2C8 321 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 ZNF556Q9HAH1 456 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 TAF9BQ9HBM6 251 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 SDR39U1Q9NRG7 319 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 JPT1Q9UK76 154 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 OR52A1Q9UKL2 312 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 TRAPPC2LQ9UL33 140 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 RPH3ALQ9UNE2 315 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 GOLT1BQ9Y3E0 138 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 RAP2CQ9Y3L5 183 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.92□□□□□ -2.1
VRK3-204ENST00000593912 V9GYQ6 96 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
VRK3-204ENST00000593912 TRAV26-2A0A0B4J265 109 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 DPPA5A6NC42 116 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 DHRS7CA6NNS2 312 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 C9JCJ5 164 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 H7C1H1 209 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 GEMIN2O14893 280 aaKnown RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 RAB29O14966 203 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 SYT7O43581 403 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 YPEL1O60688 119 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 SULT1C4O75897 302 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 OR7C1O76099 320 aaPredicted RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 DIRAS1O95057 198 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 YIF1AO95070 293 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 APOA2P02652 100 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 H1F0P07305 194 aaKnown RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 BPGMP07738 259 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 TMEM225BP0DP42 221 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 TCP1P17987 556 aaKnown RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 ALOX5APP20292 161 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 CCL1P22362 96 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 EVI2AP22794 236 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 RIDAP52758 137 aaKnown RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 PAX9P55771 341 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 IL13RA2Q14627 380 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 IRF3Q14653 427 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 ZNF829Q3KNS6 432 aaPredicted RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 DDI2Q5TDH0 399 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 REG3GQ6UW15 175 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 C9orf47Q6ZRZ4 202 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 FAM220AQ7Z4H9 259 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 SLC25A42Q86VD7 318 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 UBAC2Q8NBM4 344 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 DUSP18Q8NEJ0 188 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 DCANP1Q8TF63 244 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 BAALCQ8WXS3 180 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 GRAMD2BQ96HH9 432 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 CXorf58Q96LI9 332 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 OPALINQ96PE5 141 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 YPEL2Q96QA6 119 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 OR52B2Q96RD2 323 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 SPIN2AQ99865 258 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 APOL4Q9BPW4 351 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 SPIN2BQ9BPZ2 258 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 ELAC2Q9BQ52 826 aaKnown RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 HINT2Q9BX68 163 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 RAB17Q9H0T7 212 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 VSIRQ9H7M9 311 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 CCDC167Q9P0B6 97 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 PIPOXQ9P0Z9 390 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 KLK11Q9UBX7 282 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 CLEC2DQ9UHP7 191 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 MAGEL2Q9UJ55 1249 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 LAMP5Q9UJQ1 280 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 IKZF2Q9UKS7 526 aa1.91□□□□□ -2.1
VRK3-204ENST00000593912 RCL1Q9Y2P8 373 aaKnown RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 V9GYY5 206 aaPredicted RBP1.91□□□□□ -2.1
VRK3-204ENST00000593912 TRAV14DV4A0A0A6YYC5 116 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 TRAV2A0A0B4J234 112 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 TRAV5A0A0B4J249 113 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 HELTA6NFD8 242 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 CGB1A6NKQ9 187 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 RAB27BO00194 218 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 UBDO15205 165 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 RPP14O95059 124 aaKnown RBP1.9□□□□□ -2.11
VRK3-204ENST00000593912 SERPINA3P01011 423 aa1.9□□□□□ -2.11
VRK3-204ENST00000593912 CST1P01037 141 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms