RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GINS4Q9BRT9 223 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 SRD5A3Q9H8P0 318 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 NKX1-2Q9UD57 310 aaPredicted RBP12.33□□□□□ -0.44
LIG1-205ENST00000593425 DMRT1Q9Y5R6 373 aa12.33□□□□□ -0.44
LIG1-205ENST00000593425 RAB27BO00194 218 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 TUSC2O75896 110 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 OR2J3O76001 311 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 PSMA1P25786 263 aaKnown RBP12.32□□□□□ -0.44
LIG1-205ENST00000593425 OR10A3P58181 314 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 DEFB114Q30KQ6 69 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 C19orf35Q6ZS72 473 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 OSR1Q8TAX0 266 aaPredicted RBP12.32□□□□□ -0.44
LIG1-205ENST00000593425 DUSP21Q9H596 190 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 SELENOKQ9Y6D0 94 aa12.32□□□□□ -0.44
LIG1-205ENST00000593425 C2orf70A6NJV1 201 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 OR11H12B2RN74 326 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 J3QRK9 145 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 HLA-AP01891 365 aaKnown RBP12.31□□□□□ -0.44
LIG1-205ENST00000593425 HIST1H1DP16402 221 aaKnown RBP12.31□□□□□ -0.44
LIG1-205ENST00000593425 CDK10Q15131 360 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 GUCA2BQ16661 112 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 C15orf32Q32M92 178 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 TTC9CQ8N5M4 171 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 WDR89Q96FK6 387 aaPredicted RBP12.31□□□□□ -0.44
LIG1-205ENST00000593425 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 VCXQ9H320 206 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 ZC4H2Q9NQZ6 224 aa12.31□□□□□ -0.44
LIG1-205ENST00000593425 ELF5Q9UKW6 265 aaPredicted RBP12.31□□□□□ -0.44
LIG1-205ENST00000593425 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 RGS10O43665 173 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 FCGR3BO75015 233 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 FOLR2P14207 255 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 GADD45AP24522 165 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 MAP2K4P45985 399 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 ARFRP1Q13795 201 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 OR2B11Q5JQS5 317 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 MMD2Q8IY49 270 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 NECAP1Q8NC96 275 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 CACNG8Q8WXS5 425 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
LIG1-205ENST00000593425 MGLLQ99685 303 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 TPRKBQ9Y3C4 175 aa12.3□□□□□ -0.44
LIG1-205ENST00000593425 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 CREBL2O60519 120 aaPredicted RBP12.29□□□□□ -0.44
LIG1-205ENST00000593425 ACTL6BO94805 426 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 PSMD7P51665 324 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 AQP4P55087 323 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
LIG1-205ENST00000593425 Q6ZS49 121 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 KCTD9Q7L273 389 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 DCUN1D5Q9BTE7 237 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 CCDC90BQ9GZT6 254 aa12.29□□□□□ -0.44
LIG1-205ENST00000593425 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 E7EUB6 86 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 GGCTO75223 188 aaKnown RBP12.28□□□□□ -0.44
LIG1-205ENST00000593425 OR2C1O95371 312 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 IGLV2-14P01704 120 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 RAB6AP20340 208 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 RANBP1P43487 201 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 SSX1Q16384 188 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 ZNF645Q8N7E2 425 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 ACOT13Q9NPJ3 140 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 FBXL7Q9UJT9 491 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 S4R3C0 116 aa12.28□□□□□ -0.44
LIG1-205ENST00000593425 A0A1B0GW64 132 aa12.27□□□□□ -0.45
LIG1-205ENST00000593425 LGALS9O00182 355 aa12.27□□□□□ -0.45
LIG1-205ENST00000593425 IL6RP08887 468 aaPredicted RBP12.27□□□□□ -0.45
LIG1-205ENST00000593425 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.45
LIG1-205ENST00000593425 TALDO1P37837 337 aa12.27□□□□□ -0.45
LIG1-205ENST00000593425 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.45
LIG1-205ENST00000593425 TECRQ9NZ01 308 aaKnown RBP12.27□□□□□ -0.45
LIG1-205ENST00000593425 RBMX2Q9Y388 322 aaKnown RBP12.27□□□□□ -0.45
LIG1-205ENST00000593425 TRAV1-2A0A0B4J238 106 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 IGKV1D-13A0A0B4J2D9 117 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 TMEM213A2RRL7 107 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 NPIPB5A8MRT5 1133 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 PDCD5O14737 125 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 NDUFB8O95169 186 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 HLA-DQB1P01920 261 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 IGKV1-13P0DP09 117 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 CBLN1P23435 193 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 DTYMKP23919 212 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 CRHBPP24387 322 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 FAM209BQ5JX69 171 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 PRSS48Q7RTY5 328 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 NRG4Q8WWG1 115 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 FANCD2OSQ96PS1 177 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 FYTTD1Q96QD9 318 aaKnown RBP12.26□□□□□ -0.45
LIG1-205ENST00000593425 OR51E2Q9H255 320 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 MLXQ9UH92 298 aa12.26□□□□□ -0.45
LIG1-205ENST00000593425 MRPS7Q9Y2R9 242 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms