RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 GPR141Q7Z602 305 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 ACOT12Q8WYK0 555 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 TMEM68Q96MH6 324 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 PHB2Q99623 299 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 DCUN1D5Q9BTE7 237 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 NDUFA13Q9P0J0 144 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 ZNF256Q9Y2P7 627 aaPredicted RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 MRPS7Q9Y2R9 242 aaKnown RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 PRELID3BQ9Y3B1 194 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 LSM4Q9Y4Z0 139 aaKnown RBP10.69□□□□□ -0.7
APOC1-208ENST00000592535 CEPT1Q9Y6K0 416 aa10.69□□□□□ -0.7
APOC1-208ENST00000592535 C13orf42A0A1B0GVH6 325 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 MEIS3P1A6NDR6 274 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 SAP30O75446 220 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 AADACP22760 399 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 FCGR2CP31995 323 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 CDK10Q15131 360 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 ACSM6Q6P461 480 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 ZNF429Q86V71 674 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 ANKRD13BQ86YJ7 626 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 CROCCP3Q8IVE0 287 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 TCTEX1D2Q8WW35 142 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 SRSF12Q8WXF0 261 aaKnown RBP10.68□□□□□ -0.7
APOC1-208ENST00000592535 SNAPC3Q92966 411 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 GPHA2Q96T91 129 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 HSD17B10Q99714 261 aaKnown RBP10.68□□□□□ -0.7
APOC1-208ENST00000592535 TINAGL1Q9GZM7 467 aaPredicted RBP10.68□□□□□ -0.7
APOC1-208ENST00000592535 ZNF430Q9H8G1 570 aaPredicted RBP10.68□□□□□ -0.7
APOC1-208ENST00000592535 CCL28Q9NRJ3 127 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 COA4Q9NYJ1 87 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 TAS2R8Q9NYW2 309 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 DNAH9Q9NYC9 4486 aa10.68□□□□□ -0.7
APOC1-208ENST00000592535 A0A0G2JLM5 398 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 SMIM31A0A1B0GVY4 71 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 ANKRD34BA5PLL1 514 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 XRCC3O43542 346 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 BRI3O95415 125 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 LY86O95711 162 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 PPYP01298 95 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 BRWD1-AS2P59051 145 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 UBE2NLQ5JXB2 153 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 C10orf55Q5SWW7 151 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 VKORC1L1Q8N0U8 176 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 MFSD4AQ8N468 514 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 SECTM1Q8WVN6 248 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 S100A16Q96FQ6 103 aaKnown RBP10.67□□□□□ -0.7
APOC1-208ENST00000592535 FUNDC2Q9BWH2 189 aa10.67□□□□□ -0.7
APOC1-208ENST00000592535 MPPED1O15442 326 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 TNFSF12O43508 249 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 RBMXL2O75526 392 aaKnown RBP10.66□□□□□ -0.7
APOC1-208ENST00000592535 OR9G9P0C7N8 305 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 CBX5P45973 191 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 TMBIM6P55061 237 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 DYRK1AQ13627 763 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 VAX1Q5SQQ9 334 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 GPR107Q5VW38 600 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 ZNF66Q6ZN08 573 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 MMD2Q8IY49 270 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 SAMD12Q8N8I0 201 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 ADAD2Q8NCV1 583 aaKnown RBP10.66□□□□□ -0.7
APOC1-208ENST00000592535 OR4S2Q8NH73 311 aa10.66□□□□□ -0.7
APOC1-208ENST00000592535 DGCR14Q96DF8 476 aaKnown RBP10.66□□□□□ -0.7
APOC1-208ENST00000592535 NAA50Q9GZZ1 169 aaKnown RBP10.66□□□□□ -0.7
APOC1-208ENST00000592535 RANGRFQ9HD47 186 aaPredicted RBP10.66□□□□□ -0.7
APOC1-208ENST00000592535 ZNF701M0R085 212 aaPredicted RBP10.65□□□□□ -0.7
APOC1-208ENST00000592535 CREBL2O60519 120 aaPredicted RBP10.65□□□□□ -0.7
APOC1-208ENST00000592535 ACTL6BO94805 426 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 PRH1P02810 166 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 SPNP16150 400 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 TAS2R20P59543 309 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 FXYD4P59646 89 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 NCS1P62166 190 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 MSMO1Q15800 293 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 CTF1Q16619 201 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 TMEM69Q5SWH9 247 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 PUSL1Q8N0Z8 303 aaKnown RBP10.65□□□□□ -0.7
APOC1-208ENST00000592535 OR5AP2Q8NGF4 316 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 BCL7BQ9BQE9 202 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 SLC5A7Q9GZV3 580 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 IFT46Q9NQC8 304 aa10.65□□□□□ -0.7
APOC1-208ENST00000592535 KBTBD11O94819 623 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 OR2A4O95047 310 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 GABARAPO95166 117 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 TRBV12-3P01733 135 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 ZP3P21754 424 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 ZNF45Q02386 682 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 ZNF343Q6P1L6 599 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 HAPLN4Q86UW8 402 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 CLVS1Q8IUQ0 354 aaPredicted RBP10.64□□□□□ -0.71
APOC1-208ENST00000592535 ZBTB34Q8NCN2 500 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 OR6Q1Q8NGQ2 317 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 TMEM167AQ8TBQ9 72 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 GIMAP1Q8WWP7 306 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 SLC25A46Q96AG3 418 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 USMG5Q96IX5 58 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 OR2A7Q96R45 310 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 OR4C12Q96R67 309 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 SPIN2AQ99865 258 aa10.64□□□□□ -0.71
APOC1-208ENST00000592535 SPIN2BQ9BPZ2 258 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms